RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 TMEM202A6NGA9 273 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 PDE2AO00408 941 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 GIPC1O14908 333 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 BUD23O43709 281 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 SH3BP5O60239 455 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 SDC3O75056 442 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 CER1O95813 267 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 FUCA1P04066 466 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 ZNF30P17039 623 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 SPINT3P49223 89 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 YPEL5P62699 121 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 MTM1Q13496 603 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 P3H1Q32P28 736 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 ESRP1Q6NXG1 681 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 CREG2Q8IUH2 290 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 SLC25A45Q8N413 288 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 PDCD7Q8N8D1 485 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 GPR26Q8NDV2 337 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 SAP25Q8TEE9 199 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 PTCD2Q8WV60 388 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 MAIP1Q8WWC4 291 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 SKA1Q96BD8 255 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 FERMT1Q9BQL6 677 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 RIOK2Q9BVS4 552 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 C1QTNF7Q9BXJ2 289 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 ZFYVE1Q9HBF4 777 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 UCKL1Q9NWZ5 548 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 CDV3Q9UKY7 258 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 CNOT6Q9ULM6 557 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 ZKSCAN5Q9Y2L8 839 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 KCTD3Q9Y597 815 aa14.18□□□□□ -0.14
SHKBP1-217ENST00000598558 TRPM6Q9BX84 2022 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 DNAH14Q0VDD8 3507 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 PGRMC1O00264 195 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 CES2O00748 559 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 SCAMP1O15126 338 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 ZNF883P0CG24 379 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 GIMD1P0DJR0 217 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 HLA-DPA1P20036 260 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 CA5AP35218 305 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 GRIA1P42261 906 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 DPTQ07507 201 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 PRPSAP1Q14558 356 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 CYP1B1Q16678 543 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 DCP2Q8IU60 420 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 RBFAQ8N0V3 343 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 FAM174AQ8TBP5 190 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 TSACCQ96A04 125 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 MAGOHBQ96A72 148 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 NAPGQ99747 312 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 TBL1YQ9BQ87 522 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 ARNT2Q9HBZ2 717 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 BPIFA1Q9NP55 256 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 PIH1D1Q9NWS0 290 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 AAR2Q9Y312 384 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 NEU2Q9Y3R4 380 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 RALGAPA1Q6GYQ0 2036 aa14.17□□□□□ -0.14
SHKBP1-217ENST00000598558 FADS2P1A8MWK0 482 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 MAGEC1O60732 1142 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 CBFA2T3O75081 653 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 AP2A1O95782 977 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 SLC4A1P02730 911 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 CSF2P04141 144 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 FGF1P05230 155 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 BPIP17213 487 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 TPH1P17752 444 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 NFKBIAP25963 317 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 MSNP26038 577 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 EPHA8P29322 1005 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 COILP38432 576 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 ID4P47928 161 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 NFATC4Q14934 902 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 TRIP13Q15645 432 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 ALG11Q2TAA5 492 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 HENMT1Q5T8I9 393 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 CCDC70Q6NSX1 233 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 ENPP7Q6UWV6 458 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 ZNF765Q7L2R6 523 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 NLRP8Q86W28 1048 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 NRSN1Q8IZ57 195 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 DEFB124Q8NES8 71 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 BLOC1S5Q8TDH9 187 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 OR1E3Q8WZA6 343 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 AP2M1Q96CW1 435 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 CAPZA3Q96KX2 299 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 FSD1LQ9BXM9 530 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 TEX101Q9BY14 249 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 GPR63Q9BZJ6 419 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 FAM83DQ9H4H8 585 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 MRPL40Q9NQ50 206 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 RAB6BQ9NRW1 208 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 DNAJC28Q9NX36 388 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 IL17CQ9P0M4 197 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 TMPRSS11EQ9UL52 423 aa14.16□□□□□ -0.14
SHKBP1-217ENST00000598558 PI4KAP42356 2102 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 CACNA1EQ15878 2313 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 CEP250Q9BV73 2442 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 CTAGE9A4FU28 777 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 PCDHGA12O60330 932 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 DFNA5O60443 496 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms