RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 PTSQ03393 145 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 NIPAL4Q0D2K0 466 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 PTPRRQ15256 657 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 LRRC66Q68CR7 880 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 TAF8Q7Z7C8 310 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 HEATR4Q86WZ0 1026 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 CCNYQ8ND76 341 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 GPBAR1Q8TDU6 330 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 DCBLD2Q96PD2 775 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 ANP32EQ9BTT0 268 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 FRMD8Q9BZ67 464 aaPredicted RBP17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 TMEM168Q9H0V1 697 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 SIRPGQ9P1W8 387 aa17.9■□□□□ 0.46
CHMP2A-203ENST00000597209 CAPN8A6NHC0 703 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 NOBOXO60393 691 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 MPOP05164 745 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 PYGLP06737 847 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 EPHB1P54762 984 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 HADHBP55084 474 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 SPIDRQ14159 915 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 RAET1GQ6H3X3 334 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 ADAMTSL4Q6UY14 1074 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 RHOT1Q8IXI2 618 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 NRSN1Q8IZ57 195 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 CCDC74AQ96AQ1 378 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 SCARF2Q96GP6 870 aaPredicted RBP17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 LGMNQ99538 433 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 MAK16Q9BXY0 300 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 BRD8Q9H0E9 1235 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 ABCG8Q9H221 673 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 PCDH9Q9HC56 1237 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 TRNAU1APQ9NX07 287 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 DDX56Q9NY93 547 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 APPL1Q9UKG1 709 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 CHKBQ9Y259 395 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 SLC17A4Q9Y2C5 497 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 PCDHGA8Q9Y5G5 932 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 ITPR1Q14643 2758 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 RP1P56715 2156 aa17.89■□□□□ 0.45
CHMP2A-203ENST00000597209 LAMA5O15230 3695 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 APOL1O14791 398 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 JCHAINP01591 159 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 FUCA1P04066 466 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 IVLP07476 585 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 GLB1P16278 677 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 MLLT3P42568 568 aaPredicted RBP17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 GPR1P46091 355 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 STC1P52823 247 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 PDX1P52945 283 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 TCEA2Q15560 299 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 CNTD1Q8N815 330 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 FAM46DQ8NEK8 389 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 AP2M1Q96CW1 435 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 ATXN7L3BQ96GX2 97 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 HIC2Q96JB3 615 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 CARS2Q9HA77 564 aaKnown RBP17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 ASCL3Q9NQ33 180 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 RABGEF1Q9UJ41 708 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 MOSPD1Q9UJG1 213 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 TTLL3Q9Y4R7 772 aa17.88■□□□□ 0.45
CHMP2A-203ENST00000597209 TMX2-CTNND1H3BSU7 103 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 LCA5LO95447 670 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 SOD1P00441 154 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 KRT1P04264 644 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 MMP2P08253 660 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 ITPKBP27987 946 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 PCBP4P57723 403 aaKnown RBP17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 SKOR1P84550 965 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 PEX6Q13608 980 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 HLTFQ14527 1009 aaKnown RBP eCLIP17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 PDK1Q15118 436 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 C14orf28Q4W4Y0 310 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 CERCAMQ5T4B2 595 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 C17orf82Q86X59 251 aaPredicted RBP17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 NRROSQ86YC3 692 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 TC2NQ8N9U0 490 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 ZNF248Q8NDW4 579 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 CCL4L1Q8NHW4 92 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 WDR36Q8NI36 951 aaKnown RBP17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 KIAA1524Q8TCG1 905 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 LRRN4Q8WUT4 740 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 LIN37Q96GY3 246 aaPredicted RBP17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 OLFM3Q96PB7 478 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 SMIM14Q96QK8 99 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 GFM1Q96RP9 751 aaKnown RBP17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 GSDMCQ9BYG8 508 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 TRIM5Q9C035 493 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 LRRN3Q9H3W5 708 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 SUFUQ9UMX1 484 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 SATB2Q9UPW6 733 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 HEY1Q9Y5J3 304 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 ZFYVE26Q68DK2 2539 aa17.87■□□□□ 0.45
CHMP2A-203ENST00000597209 CCDC187A0A096LP49 1063 aa17.86■□□□□ 0.45
CHMP2A-203ENST00000597209 A0A0U1RQS6 177 aa17.86■□□□□ 0.45
CHMP2A-203ENST00000597209 A0A1W2PNU3 283 aaPredicted RBP17.86■□□□□ 0.45
CHMP2A-203ENST00000597209 A0A1W2PQM1 296 aa17.86■□□□□ 0.45
CHMP2A-203ENST00000597209 ANKRD66B4E2M5 251 aa17.86■□□□□ 0.45
CHMP2A-203ENST00000597209 KCNK1O00180 336 aa17.86■□□□□ 0.45
CHMP2A-203ENST00000597209 PPP1R12AO14974 1030 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms