RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 HNF1BP35680 557 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 LIG3P49916 1009 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 SARNPP82979 210 aaKnown RBP15.02□□□□□ -0.01
TRIM28-207ENST00000597136 BNC1Q01954 994 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 CDK18Q07002 472 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 GALNT3Q14435 633 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 TRIM61Q5EBN2 209 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 NAPEPLDQ6IQ20 393 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 LIPIQ6XZB0 460 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 DPPA4Q7L190 304 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 LINC00523Q86TU6 105 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 TSPAN33Q86UF1 283 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 CAND1Q86VP6 1230 aaKnown RBP15.02□□□□□ -0.01
TRIM28-207ENST00000597136 LPCAT1Q8NF37 534 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 SCRN2Q96FV2 425 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 SERAC1Q96JX3 654 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 PWWP2AQ96N64 755 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 TRIB3Q96RU7 358 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 APOL2Q9BQE5 337 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.02□□□□□ -0.01
TRIM28-207ENST00000597136 ZNF106Q9H2Y7 1883 aaKnown RBP15.01□□□□□ -0.01
TRIM28-207ENST00000597136 H0Y8X5 98 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 GM2AP17900 193 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 CA4P22748 312 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 LHCGRP22888 699 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 SUOXP51687 545 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 CLDN2P57739 230 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 ELP6Q0PNE2 266 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 SLC1A5Q15758 541 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 QPCTQ16769 361 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 DUOXA1Q1HG43 343 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 SETMARQ53H47 684 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-207ENST00000597136 DENND5AQ6IQ26 1287 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 KIAA1161Q6NSJ0 714 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 ERAP2Q6P179 960 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 LRRC8BQ6P9F7 803 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 SLC23A3Q6PIS1 610 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 PPP1R21Q6ZMI0 780 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 ZNF534Q76KX8 674 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 KIAA2013Q8IYS2 634 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 CXorf40AQ8TE69 158 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 IFT43Q96FT9 208 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 SERPINB12Q96P63 405 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 KLF6Q99612 283 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-207ENST00000597136 FRMD8Q9BZ67 464 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-207ENST00000597136 XAB2Q9HCS7 855 aaKnown RBP15.01□□□□□ -0.01
TRIM28-207ENST00000597136 CASS4Q9NQ75 786 aa15.01□□□□□ -0.01
TRIM28-207ENST00000597136 A0A0J9YYE9 177 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 A0A1B0GTW7 788 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 A0A1W2PQ67 120 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 POM121BA6NF01 834 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 ANKRD66B4E2M5 251 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 GDF9O60383 454 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 AVILO75366 819 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 TRBC1P01850 177 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 PIRTP0C851 137 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 MLNP12872 115 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 C6P13671 934 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 MAGEA3P43357 314 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 TNNT3P45378 269 aaPredicted RBP15□□□□□ -0.01
TRIM28-207ENST00000597136 EPHB1P54762 984 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 CSRP2Q16527 193 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 SIRPB2Q5JXA9 342 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 FNBP1LQ5T0N5 605 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 DENND2CQ68D51 928 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 CRTC1Q6UUV9 634 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 RFLNAQ6ZTI6 216 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 GSPT2Q8IYD1 628 aaKnown RBP15□□□□□ -0.01
TRIM28-207ENST00000597136 CBARPQ8N350 705 aaPredicted RBP15□□□□□ -0.01
TRIM28-207ENST00000597136 SLC25A41Q8N5S1 370 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 OR52K1Q8NGK4 314 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 OR2I1PQ8NGU4 316 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15□□□□□ -0.01
TRIM28-207ENST00000597136 MCCC1Q96RQ3 725 aaPredicted RBP15□□□□□ -0.01
TRIM28-207ENST00000597136 FMO2Q99518 471 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 FOXP3Q9BZS1 431 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 ARNT2Q9HBZ2 717 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 CAPN10Q9HC96 672 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 AASDHPPTQ9NRN7 309 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 MTRF1LQ9UGC7 380 aaKnown RBP15□□□□□ -0.01
TRIM28-207ENST00000597136 SPTBN2O15020 2390 aa15□□□□□ -0.01
TRIM28-207ENST00000597136 A0A1B0GVT2 93 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 A0A1W2PR77 199 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 KHNYNO15037 678 aaKnown RBP14.99□□□□□ -0.01
TRIM28-207ENST00000597136 LRP3O75074 770 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 PPFIA2O75334 1257 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 TM7SF2O76062 418 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 NDST3O95803 873 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 FAM153BP0C7A2 387 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 ATXN1LP0C7T5 689 aaKnown RBP14.99□□□□□ -0.01
TRIM28-207ENST00000597136 GNSP15586 552 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 HLA-DPA1P20036 260 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 VIPR1P32241 457 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 CHRNA4P43681 627 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 ARL4CP56559 192 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 CDH17Q12864 832 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 SGCGQ13326 291 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 MTM1Q13496 603 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 CNGA3Q16281 694 aa14.99□□□□□ -0.01
TRIM28-207ENST00000597136 HIF1AQ16665 826 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms