RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 RAET1GQ6H3X3 334 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 PNCKQ6P2M8 343 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 KDELC1Q6UW63 502 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 LYSMD3Q7Z3D4 306 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 DCP2Q8IU60 420 aaKnown RBP11.08□□□□□ -0.64
LIG1-211ENST00000596457 NAXDQ8IW45 347 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 PELI3Q8N2H9 469 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 OXR1Q8N573 874 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 SLC35B2Q8TB61 432 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 CCHCR1Q8TD31 782 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 MAIP1Q8WWC4 291 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 TADA1Q96BN2 335 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 MS4A14Q96JA4 679 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 MRGPRX2Q96LB1 330 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 SPATA13Q96N96 652 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 MCCC1Q96RQ3 725 aaPredicted RBP11.08□□□□□ -0.64
LIG1-211ENST00000596457 TRIB3Q96RU7 358 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 APOL2Q9BQE5 337 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 GPR63Q9BZJ6 419 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 SUDS3Q9H7L9 328 aaPredicted RBP11.08□□□□□ -0.64
LIG1-211ENST00000596457 RPL26L1Q9UNX3 145 aaKnown RBP11.08□□□□□ -0.64
LIG1-211ENST00000596457 SPEGQ15772 3267 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 SPTY2D1-AS1A0A0U1RR47 76 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 C5orf60A6NFR6 353 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 K7ESM1 405 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 PSMD11O00231 422 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 ANXA9O76027 345 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 ZNF883P0CG24 379 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 ETS1P14921 441 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 HTR1BP28222 390 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 PMLP29590 882 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 ACTN2P35609 894 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 GPR1P46091 355 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 GNG11P61952 73 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 YPEL5P62699 121 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 MTM1Q13496 603 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 AGERQ15109 404 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 SLC14A2Q15849 920 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 SIRPB2Q5JXA9 342 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 PSAPL1Q6NUJ1 521 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 NYAP1Q6ZVC0 841 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 GSTA5Q7RTV2 222 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 TECPR1Q7Z6L1 1165 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 PRUNE1Q86TP1 453 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 HID1Q8IV36 788 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 EID2Q8N6I1 236 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 BLOC1S5Q8TDH9 187 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 SCAMP4Q969E2 229 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 TSACCQ96A04 125 aaPredicted RBP11.07□□□□□ -0.64
LIG1-211ENST00000596457 AP2M1Q96CW1 435 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 DTD2Q96FN9 168 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 PBKQ96KB5 322 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 GORASP1Q9BQQ3 440 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 ABCG8Q9H221 673 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 ERVMER34-1Q9H9K5 563 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 ZFYVE1Q9HBF4 777 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 BPIFA1Q9NP55 256 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 PKD2L2Q9NZM6 624 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 ANGPTL2Q9UKU9 493 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 BTBD3Q9Y2F9 522 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 AAR2Q9Y312 384 aaKnown RBP11.07□□□□□ -0.64
LIG1-211ENST00000596457 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 SPO11Q9Y5K1 396 aa11.07□□□□□ -0.64
LIG1-211ENST00000596457 SPAARA0A1B0GVQ0 90 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 LOC285095A0A1B0GVY8 99 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 H3BM21 787 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 CACNB4O00305 520 aaPredicted RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 INPP4BO15327 924 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 FFAR2O15552 330 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 FLRT2O43155 660 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 BUD23O43709 281 aaKnown RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 USP12O75317 370 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 GCATO75600 419 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 ZNF189O75820 626 aaPredicted RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 METTL18O95568 372 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 JUNDP17535 347 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 EPHA8P29322 1005 aaPredicted RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 KCNJ1P48048 391 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 LMAN1P49257 510 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 STC1P52823 247 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 TERF1P54274 439 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 EIF2B5Q13144 721 aaKnown RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 C1orf61Q13536 156 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 NFATC4Q14934 902 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 SIX1Q15475 284 aaPredicted RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 SLC1A5Q15758 541 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 CCNG2Q16589 344 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 KCTD19Q17RG1 926 aaPredicted RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 PARP6Q2NL67 630 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 CCDC157Q569K6 752 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 ALS2CLQ60I27 953 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 ESRP1Q6NXG1 681 aaKnown RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 DOK6Q6PKX4 331 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 PARGQ86W56 976 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 RBFAQ8N0V3 343 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 CBARPQ8N350 705 aaPredicted RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 C17orf53Q8N3J3 647 aaPredicted RBP11.06□□□□□ -0.64
LIG1-211ENST00000596457 CCDC89Q8N998 374 aa11.06□□□□□ -0.64
LIG1-211ENST00000596457 LMX1AQ8TE12 382 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms