RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TXLNBQ8N3L3 684 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 RNF10Q8N5U6 811 aaKnown RBP10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 CCDC112Q8NEF3 446 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 HTR3CQ8WXA8 447 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 TSACCQ96A04 125 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 EID2BQ96D98 161 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 WDR92Q96MX6 357 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 GORASP1Q9BQQ3 440 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 CLPBQ9H078 707 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 GRPEL1Q9HAV7 217 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 FGF22Q9HCT0 170 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 NLGN3Q9NZ94 848 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 CD84Q9UIB8 345 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 GUCA1BQ9UMX6 200 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 APOBEC2Q9Y235 224 aaKnown RBP10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 ITPR1Q14643 2758 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 TCRBV7S2A1N4TA0A589 114 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 FAM221BA6H8Z2 402 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 F5H423 210 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 H3BM21 787 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 MTSS1O43312 755 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 AQP9O43315 295 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 TRIM16O95361 564 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 HOXC4P09017 264 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 MYF5P13349 255 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 TSHRP16473 764 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 NFKBIAP25963 317 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 HK3P52790 923 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 SRP54P61011 504 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 PPARDQ03181 441 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 DPTQ07507 201 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 KLF1Q13351 362 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 C1orf61Q13536 156 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 PCSK7Q16549 785 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 DEFB133Q30KQ1 61 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 PRRT3Q5FWE3 981 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 ENPP7Q6UWV6 458 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 HEATR4Q86WZ0 1026 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 NDUFAF2Q8N183 169 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 LMX1AQ8TE12 382 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 PTCD2Q8WV60 388 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 BTN2A2Q8WVV5 523 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 OR1E3Q8WZA6 343 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 SCAMP4Q969E2 229 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 OXNAD1Q96HP4 312 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 TBATAQ96M53 351 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 CNTNAP3BQ96NU0 1288 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 WDR24Q96S15 920 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 AGAP2Q99490 1192 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 TEX101Q9BY14 249 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 CNTNAP3Q9BZ76 1288 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 ABCG8Q9H221 673 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 WDR26Q9H7D7 661 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 MRPL40Q9NQ50 206 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 UBP1Q9NZI7 540 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 R3HDM2Q9Y2K5 976 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 NEUROG3Q9Y4Z2 214 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 CSNK1G3Q9Y6M4 447 aa10.97□□□□□ -0.65
SHKBP1-206ENST00000595523 C1orf232A0A0U1RR37 186 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 H7C0C1 242 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 CACNB4O00305 520 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 KRT86O43790 486 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 PMPCBO75439 489 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 RFPL3O75679 317 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 RASGRP1O95267 797 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 FUCA1P04066 466 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 PIRTP0C851 137 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 RBP3P10745 1247 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 MYCLP1P12525 358 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 CKMT1AP12532 417 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 CKMT2P17540 419 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 ACP1P24666 158 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 HTR1BP28222 390 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 TEAD1P28347 426 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 ATP5OP48047 213 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 CLDN6P56747 220 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 EIF3EP60228 445 aaKnown RBP10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 CDK3Q00526 305 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 CDK18Q07002 472 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 TCEA2Q15560 299 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 CCDC157Q569K6 752 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 FAXCQ5TGI0 409 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 DHRS13Q6UX07 377 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 ZNF662Q6ZS27 426 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 ZNF765Q7L2R6 523 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 LYSMD3Q7Z3D4 306 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 MARCH9Q86YJ5 346 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 HID1Q8IV36 788 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 UBL4BQ8N7F7 174 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 FAM181AQ8N9Y4 354 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 OR56A4Q8NGH8 313 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 GATA6Q92908 595 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 MRGPRX2Q96LB1 330 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 APOLD1Q96LR9 279 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 FCRL5Q96RD9 977 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 VAT1Q99536 393 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 MLPHQ9BV36 600 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 ADGRE3Q9BY15 652 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 SLC13A1Q9BZW2 595 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 TSGA10Q9BZW7 698 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms