RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 DOCK9Q9BZ29 2069 aa15.01□□□□□ -0.01
UPF1-202ENST00000594243 GON4LQ3T8J9 2241 aa15□□□□□ -0.01
UPF1-202ENST00000594243 A0A0U1RQS6 177 aa15□□□□□ -0.01
UPF1-202ENST00000594243 F5H423 210 aaPredicted RBP15□□□□□ -0.01
UPF1-202ENST00000594243 ENC1O14682 589 aa15□□□□□ -0.01
UPF1-202ENST00000594243 LIASO43766 372 aa15□□□□□ -0.01
UPF1-202ENST00000594243 CEP104O60308 925 aa15□□□□□ -0.01
UPF1-202ENST00000594243 SDC3O75056 442 aa15□□□□□ -0.01
UPF1-202ENST00000594243 PIAS2O75928 621 aa15□□□□□ -0.01
UPF1-202ENST00000594243 C1SP09871 688 aa15□□□□□ -0.01
UPF1-202ENST00000594243 JUNDP17535 347 aa15□□□□□ -0.01
UPF1-202ENST00000594243 DGKAP23743 735 aa15□□□□□ -0.01
UPF1-202ENST00000594243 TEAD1P28347 426 aa15□□□□□ -0.01
UPF1-202ENST00000594243 GPR1P46091 355 aa15□□□□□ -0.01
UPF1-202ENST00000594243 KIAA1024LP59773 190 aa15□□□□□ -0.01
UPF1-202ENST00000594243 FOXK2Q01167 660 aa15□□□□□ -0.01
UPF1-202ENST00000594243 PPARDQ03181 441 aa15□□□□□ -0.01
UPF1-202ENST00000594243 EIF2B5Q13144 721 aaKnown RBP15□□□□□ -0.01
UPF1-202ENST00000594243 SLC1A5Q15758 541 aa15□□□□□ -0.01
UPF1-202ENST00000594243 CCNG2Q16589 344 aa15□□□□□ -0.01
UPF1-202ENST00000594243 PARP6Q2NL67 630 aa15□□□□□ -0.01
UPF1-202ENST00000594243 TPRG1LQ5T0D9 272 aa15□□□□□ -0.01
UPF1-202ENST00000594243 FAXCQ5TGI0 409 aa15□□□□□ -0.01
UPF1-202ENST00000594243 RAET1GQ6H3X3 334 aa15□□□□□ -0.01
UPF1-202ENST00000594243 KDM7AQ6ZMT4 941 aa15□□□□□ -0.01
UPF1-202ENST00000594243 ARHGEF18Q6ZSZ5 1173 aa15□□□□□ -0.01
UPF1-202ENST00000594243 TMC3Q7Z5M5 1100 aa15□□□□□ -0.01
UPF1-202ENST00000594243 FUBP1Q96AE4 644 aaKnown RBP15□□□□□ -0.01
UPF1-202ENST00000594243 PBKQ96KB5 322 aa15□□□□□ -0.01
UPF1-202ENST00000594243 WDR92Q96MX6 357 aa15□□□□□ -0.01
UPF1-202ENST00000594243 GPR63Q9BZJ6 419 aa15□□□□□ -0.01
UPF1-202ENST00000594243 SLC13A1Q9BZW2 595 aa15□□□□□ -0.01
UPF1-202ENST00000594243 ABCG8Q9H221 673 aa15□□□□□ -0.01
UPF1-202ENST00000594243 TRABDQ9H4I3 376 aa15□□□□□ -0.01
UPF1-202ENST00000594243 WDR26Q9H7D7 661 aa15□□□□□ -0.01
UPF1-202ENST00000594243 PHPT1Q9NRX4 125 aaPredicted RBP15□□□□□ -0.01
UPF1-202ENST00000594243 RAD18Q9NS91 495 aa15□□□□□ -0.01
UPF1-202ENST00000594243 HOMER3Q9NSC5 361 aa15□□□□□ -0.01
UPF1-202ENST00000594243 ZNF148Q9UQR1 794 aa15□□□□□ -0.01
UPF1-202ENST00000594243 TMEM131Q92545 1883 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 GIPC1O14908 333 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 FGGP02679 453 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 ALPPL2P10696 532 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 PSMB4P28070 264 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 CXCR5P32302 372 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 ACTN2P35609 894 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 SPINT3P49223 89 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 LONRF2Q1L5Z9 754 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 P3H1Q32P28 736 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 SIRPB2Q5JXA9 342 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 KANSL1Q7Z3B3 1105 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 LYSMD3Q7Z3D4 306 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 GLRX5Q86SX6 157 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 SLC35F6Q8N357 371 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 SLC25A45Q8N413 288 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 SLC25A41Q8N5S1 370 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 EID2Q8N6I1 236 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 BAHD1Q8TBE0 780 aaPredicted RBP14.99□□□□□ -0.01
UPF1-202ENST00000594243 C1orf54Q8WWF1 131 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 ATG4AQ8WYN0 398 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 TBATAQ96M53 351 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 TEX101Q9BY14 249 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 CDH19Q9H159 772 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 FAM83DQ9H4H8 585 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 HACD3Q9P035 362 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 SPASTQ9UBP0 616 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 CD84Q9UIB8 345 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 SHOC2Q9UQ13 582 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 BTBD3Q9Y2F9 522 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 ZNF711Q9Y462 761 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 CSNK1G3Q9Y6M4 447 aa14.99□□□□□ -0.01
UPF1-202ENST00000594243 MED19A0JLT2 244 aaPredicted RBP14.98□□□□□ -0.01
UPF1-202ENST00000594243 K7ESM1 405 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 TNFRSF10CO14798 259 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 SCAMP1O15126 338 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 PSMD3O43242 534 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 TNFSF14O43557 240 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 RASGRP1O95267 797 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 LDOC1O95751 146 aaPredicted RBP14.98□□□□□ -0.01
UPF1-202ENST00000594243 TNFP01375 233 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 FGF1P05230 155 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 ATXN1LP0C7T5 689 aaKnown RBP14.98□□□□□ -0.01
UPF1-202ENST00000594243 PIRTP0C851 137 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 MYCLP1P12525 358 aaPredicted RBP14.98□□□□□ -0.01
UPF1-202ENST00000594243 CTSEP14091 401 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 HK3P52790 923 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 GDF10P55107 478 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 SRP54P61011 504 aaKnown RBP14.98□□□□□ -0.01
UPF1-202ENST00000594243 SIM1P81133 766 aaPredicted RBP14.98□□□□□ -0.01
UPF1-202ENST00000594243 OASLQ15646 514 aaKnown RBP14.98□□□□□ -0.01
UPF1-202ENST00000594243 DRICH1Q6PGQ1 229 aaPredicted RBP14.98□□□□□ -0.01
UPF1-202ENST00000594243 RANBP10Q6VN20 620 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 RFLNAQ6ZTI6 216 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 HEATR4Q86WZ0 1026 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 PHACTR4Q8IZ21 702 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 OR56A4Q8NGH8 313 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 SCAMP4Q969E2 229 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 RTP4Q96DX8 246 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 GORASP1Q9BQQ3 440 aa14.98□□□□□ -0.01
UPF1-202ENST00000594243 DUSP23Q9BVJ7 150 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms