RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 PSMD11O00231 422 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 CEACAM5P06731 702 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 CR2P20023 1033 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 ALDH4A1P30038 563 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 ETV3P41162 512 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 OR1D5P58170 312 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 CLPPQ16740 277 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-203ENST00000593641 CCDC183Q5T5S1 534 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 XKR5Q6UX68 686 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 USP45Q70EL2 814 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 PRICKLE2Q7Z3G6 844 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 ZNF438Q7Z4V0 828 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 ZFAND4Q86XD8 727 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 HSPH1Q92598 858 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 FRMD8Q9BZ67 464 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-203ENST00000593641 FAM117AQ9C073 453 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 RTN4Q9NQC3 1192 aaKnown RBP22.63■■□□□ 1.21
SSBP4-203ENST00000593641 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.63■■□□□ 1.21
SSBP4-203ENST00000593641 SUFUQ9UMX1 484 aa22.63■■□□□ 1.21
SSBP4-203ENST00000593641 HEMK1Q9Y5R4 338 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-203ENST00000593641 C9orf172C9J069 976 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 FGF1P05230 155 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 KRT10P13645 584 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 LHCGRP22888 699 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 AMPD1P23109 780 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 SERPINB6P35237 376 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 KLHL30Q0D2K2 578 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 TRAF2Q12933 501 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 NFATC3Q12968 1075 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 C16orf72Q14CZ0 275 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 BOLA3Q53S33 107 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 RALGPS1Q5JS13 557 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 SLC30A9Q6PML9 568 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 HSD11B1LQ7Z5J1 315 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 POLNQ7Z5Q5 900 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 VASH2Q86V25 355 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 C17orf82Q86X59 251 aaPredicted RBP22.62■■□□□ 1.21
SSBP4-203ENST00000593641 NRROSQ86YC3 692 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 PGBD5Q8N414 524 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 EXTL1Q92935 676 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 B3GNT4Q9C0J1 378 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 AIPL1Q9NZN9 384 aa22.62■■□□□ 1.21
SSBP4-203ENST00000593641 NPIPB15A6NHN6 443 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-203ENST00000593641 DDX3XO00571 662 aaKnown RBP eCLIP22.61■■□□□ 1.21
SSBP4-203ENST00000593641 HGSO14964 777 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-203ENST00000593641 B4GAT1O43505 415 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 MAFKO60675 156 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 ECEL1O95672 775 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 PEX11BO96011 259 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 AK4P27144 223 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-203ENST00000593641 IL1R2P27930 398 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 TEAD1P28347 426 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 ANP32AP39687 249 aaKnown RBP22.61■■□□□ 1.21
SSBP4-203ENST00000593641 PRKCIP41743 596 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 MMP13P45452 471 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 CDH6P55285 790 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 MAXP61244 160 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 TYRO3Q06418 890 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 NR1D2Q14995 579 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 LINC00303Q3SY05 128 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 ARMC12Q5T9G4 340 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 MARC1Q5VT66 337 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 EXD3Q8N9H8 876 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 SCRN2Q96FV2 425 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 CSPG4P5Q96PW8 444 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 NUDT22Q9BRQ3 303 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 CDH19Q9H159 772 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 CLMPQ9H6B4 373 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 ETNK2Q9NVF9 386 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 PCDHGA4Q9Y5G9 962 aa22.61■■□□□ 1.21
SSBP4-203ENST00000593641 PGLSO95336 258 aa22.6■■□□□ 1.21
SSBP4-203ENST00000593641 GPR3P46089 330 aa22.6■■□□□ 1.21
SSBP4-203ENST00000593641 GPR1P46091 355 aa22.6■■□□□ 1.21
SSBP4-203ENST00000593641 E4F1Q66K89 784 aaPredicted RBP22.6■■□□□ 1.21
SSBP4-203ENST00000593641 Q6ZVL8 140 aa22.6■■□□□ 1.21
SSBP4-203ENST00000593641 DTX1Q86Y01 620 aa22.6■■□□□ 1.21
SSBP4-203ENST00000593641 NDUFAF2Q8N183 169 aa22.6■■□□□ 1.21
SSBP4-203ENST00000593641 SLC17A4Q9Y2C5 497 aa22.6■■□□□ 1.21
SSBP4-203ENST00000593641 BSNQ9UPA5 3926 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 STMND1H3BQB6 276 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 PYCARD-AS1I3L0S3 204 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 MBD3O95983 291 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 FUCA1P04066 466 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 IVLP07476 585 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 ADCY8P40145 1251 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 CTBSQ01459 385 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 KCNC4Q03721 635 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 DOK6Q6PKX4 331 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 TSPAN33Q86UF1 283 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 CBARPQ8N350 705 aaPredicted RBP22.59■■□□□ 1.21
SSBP4-203ENST00000593641 RCBTB1Q8NDN9 531 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 CCDC74BQ96LY2 380 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 MCCC1Q96RQ3 725 aaPredicted RBP22.59■■□□□ 1.21
SSBP4-203ENST00000593641 ZMYND15Q9H091 742 aa22.59■■□□□ 1.21
SSBP4-203ENST00000593641 SMTNL1A8MU46 457 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.58■■□□□ 1.21
SSBP4-203ENST00000593641 RARAP10276 462 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 SFTPCP11686 197 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 CCL4P13236 92 aa22.58■■□□□ 1.21
SSBP4-203ENST00000593641 TCF4P15884 667 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms