RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CD84Q9UIB8 345 aa9.66□□□□□ -0.86
DDX39A-220ENST00000593008 ANAPC5Q9UJX4 755 aa9.66□□□□□ -0.86
DDX39A-220ENST00000593008 NFU1Q9UMS0 254 aa9.66□□□□□ -0.86
DDX39A-220ENST00000593008 ZFR2Q9UPR6 939 aaKnown RBP9.66□□□□□ -0.86
DDX39A-220ENST00000593008 CA5BQ9Y2D0 317 aa9.66□□□□□ -0.86
DDX39A-220ENST00000593008 FNDC3AQ9Y2H6 1198 aaKnown RBP9.66□□□□□ -0.86
DDX39A-220ENST00000593008 ZNF711Q9Y462 761 aa9.66□□□□□ -0.86
DDX39A-220ENST00000593008 FADS3Q9Y5Q0 445 aa9.66□□□□□ -0.86
DDX39A-220ENST00000593008 ARL5AQ9Y689 179 aa9.66□□□□□ -0.86
DDX39A-220ENST00000593008 PLXND1Q9Y4D7 1925 aa9.66□□□□□ -0.86
DDX39A-220ENST00000593008 CACNA1AO00555 2505 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 NCOR2Q9Y618 2525 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 SCN8AQ9UQD0 1980 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3DA0A087WVF3 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3IA0A087WXS9 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3EA0A087X179 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3KA0A087X1G2 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 A0A1B0GTW7 788 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 A0A1B0GVT2 93 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3FA6NER0 549 aaPredicted RBP9.65□□□□□ -0.86
DDX39A-220ENST00000593008 LRRC72A6NJI9 287 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 ANKRD66B4E2M5 251 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3LB9A6J9 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 ARHGAP33O14559 1287 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 MMP20O60882 483 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 CLDN7O95471 211 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 FGF1P05230 155 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 FAM153BP0C7A2 387 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3HP0C7X1 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 MAT2AP31153 395 aaKnown RBP9.65□□□□□ -0.86
DDX39A-220ENST00000593008 MAGEA3P43357 314 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 GRIA4P48058 902 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 ARSDP51689 593 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 EPHB1P54762 984 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 VSNL1P62760 191 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 GRIK2Q13002 908 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 SLC14A2Q15849 920 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 BBS9Q3SYG4 887 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 FAM153CQ494X1 144 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 PPM1JQ5JR12 505 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 FAM46CQ5VWP2 391 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 ALS2CLQ60I27 953 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3GQ6DHY5 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3CQ6IPX1 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 BRAT1Q6PJG6 821 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 DPPA4Q7L190 304 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 RABEPKQ7Z6M1 372 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TTC7BQ86TV6 843 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 ANKMY2Q8IV38 441 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 UNC5BQ8IZJ1 945 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TBC1D3Q8IZP1 549 aaPredicted RBP9.65□□□□□ -0.86
DDX39A-220ENST00000593008 MINDY1Q8N5J2 469 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 DNAAF3Q8N9W5 541 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 OR13C4Q8NGS5 318 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 OR2T34Q8NGX1 318 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 NAT14Q8WUY8 206 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 ART4Q93070 314 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 CCDC97Q96F63 343 aaPredicted RBP9.65□□□□□ -0.86
DDX39A-220ENST00000593008 LRIG1Q96JA1 1093 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 HDAC8Q9BY41 377 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 RAB17Q9H0T7 212 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 PCED1AQ9H1Q7 454 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 EBF2Q9HAK2 575 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 DYRK4Q9NR20 520 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 WHRNQ9P202 907 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 SLC17A6Q9P2U8 582 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 FEZ2Q9UHY8 353 aaPredicted RBP9.65□□□□□ -0.86
DDX39A-220ENST00000593008 FZD4Q9ULV1 537 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 CHMP2BQ9UQN3 213 aa9.65□□□□□ -0.86
DDX39A-220ENST00000593008 AAR2Q9Y312 384 aaKnown RBP9.65□□□□□ -0.86
DDX39A-220ENST00000593008 UTP11Q9Y3A2 253 aaKnown RBP9.65□□□□□ -0.86
DDX39A-220ENST00000593008 TNRC6BQ9UPQ9 1833 aaKnown RBP9.64□□□□□ -0.87
DDX39A-220ENST00000593008 C1orf232A0A0U1RR37 186 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 A0A1W2PQU0 124 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 OR51F1A6NGY5 319 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 TM4SF5O14894 197 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 WNT9AO14904 365 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 GIPC1O14908 333 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 RAD51BO15315 384 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 PLRG1O43660 514 aaKnown RBP9.64□□□□□ -0.87
DDX39A-220ENST00000593008 LDB2O43679 373 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 RNGTTO60942 597 aaKnown RBP9.64□□□□□ -0.87
DDX39A-220ENST00000593008 PIAS1O75925 651 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 SYPP08247 313 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 C6P13671 934 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 HLA-DPA1P20036 260 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 XPAP23025 273 aaPredicted RBP9.64□□□□□ -0.87
DDX39A-220ENST00000593008 CES1P23141 567 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 CD27P26842 260 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 NMBRP28336 390 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 VIPR1P32241 457 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 ETV3P41162 512 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 LIG3P49916 1009 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 AFF3P51826 1226 aaKnown RBP9.64□□□□□ -0.87
DDX39A-220ENST00000593008 ZNF140P52738 457 aaPredicted RBP9.64□□□□□ -0.87
DDX39A-220ENST00000593008 BNC1Q01954 994 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 MORF4L2Q15014 288 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 NAPEPLDQ6IQ20 393 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 PSAPL1Q6NUJ1 521 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms