RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SPO11Q9Y5K1 396 aa15.3■□□□□ 0.04
TRIM47-206ENST00000592942 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
TRIM47-206ENST00000592942 AURKAO14965 403 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 SDC3O75056 442 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 KRT37O76014 449 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 METTL18O95568 372 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 AGTP01019 485 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 NME1P15531 152 aaKnown RBP15.29■□□□□ 0.04
TRIM47-206ENST00000592942 DGKAP23743 735 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 PSMB4P28070 264 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 SPINT3P49223 89 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 ARRB1P49407 418 aaPredicted RBP15.29■□□□□ 0.04
TRIM47-206ENST00000592942 NOVA1P51513 510 aaKnown RBP15.29■□□□□ 0.04
TRIM47-206ENST00000592942 OLIG2Q13516 323 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 SUZ12Q15022 739 aaKnown RBP15.29■□□□□ 0.04
TRIM47-206ENST00000592942 SLC1A5Q15758 541 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 SIRPB2Q5JXA9 342 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 PSAPL1Q6NUJ1 521 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 LYSMD3Q7Z3D4 306 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 RASGEF1CQ8N431 466 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 RHBDD1Q8TEB9 315 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 CNTNAP3BQ96NU0 1288 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 AGAP2Q99490 1192 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 TEX101Q9BY14 249 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 FRMD8P1Q9BZ68 369 aaPredicted RBP15.29■□□□□ 0.04
TRIM47-206ENST00000592942 CNTNAP3Q9BZ76 1288 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 KCTD5Q9NXV2 234 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 CD84Q9UIB8 345 aa15.29■□□□□ 0.04
TRIM47-206ENST00000592942 C1orf232A0A0U1RR37 186 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 TMEM202A6NGA9 273 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 YKT6O15498 198 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 FLRT2O43155 660 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 CEP104O60308 925 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 PIAS2O75928 621 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 FGGP02679 453 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 FUCA1P04066 466 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 ATP1A1P05023 1023 aaKnown RBP15.28■□□□□ 0.04
TRIM47-206ENST00000592942 ITGAVP06756 1048 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 TEAD1P28347 426 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 STIP1P31948 543 aaKnown RBP15.28■□□□□ 0.04
TRIM47-206ENST00000592942 PTK2BQ14289 1009 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 NFATC4Q14934 902 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 CCNG2Q16589 344 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 N4BP2L1Q5TBK1 243 aaPredicted RBP15.28■□□□□ 0.04
TRIM47-206ENST00000592942 KCTD11Q693B1 232 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 ITPRIPL1Q6GPH6 555 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 DENND5AQ6IQ26 1287 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 MACC1Q6ZN28 852 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 PARGQ86W56 976 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 NRSN1Q8IZ57 195 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 SLC25A41Q8N5S1 370 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 SETD7Q8WTS6 366 aaKnown RBP15.28■□□□□ 0.04
TRIM47-206ENST00000592942 ZFYVE1Q9HBF4 777 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 DNAJC28Q9NX36 388 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 CNOT6Q9ULM6 557 aaKnown RBP15.28■□□□□ 0.04
TRIM47-206ENST00000592942 SHOC2Q9UQ13 582 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 CACNA1BQ00975 2339 aa15.28■□□□□ 0.04
TRIM47-206ENST00000592942 ANXA9O76027 345 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 JUNDP17535 347 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 GRK6P43250 576 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 THOP1P52888 689 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 GEMP55040 296 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 KIAA1024LP59773 190 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 SNX1Q13596 522 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 TRIP6Q15654 476 aaKnown RBP15.27■□□□□ 0.04
TRIM47-206ENST00000592942 PARP6Q2NL67 630 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 ALG11Q2TAA5 492 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 DRICH1Q6PGQ1 229 aaPredicted RBP15.27■□□□□ 0.04
TRIM47-206ENST00000592942 ENPP7Q6UWV6 458 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 ZNF765Q7L2R6 523 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 GLRX5Q86SX6 157 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 PRUNE1Q86TP1 453 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 RBFAQ8N0V3 343 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 TTC30BQ8N4P2 665 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 GLIS1Q8NBF1 620 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 TSACCQ96A04 125 aaPredicted RBP15.27■□□□□ 0.04
TRIM47-206ENST00000592942 AP2M1Q96CW1 435 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 MS4A14Q96JA4 679 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 FERMT1Q9BQL6 677 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 RIOK2Q9BVS4 552 aaKnown RBP15.27■□□□□ 0.04
TRIM47-206ENST00000592942 SLC32A1Q9H598 525 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 TOR4AQ9NXH8 423 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 DRG1Q9Y295 367 aaKnown RBP15.27■□□□□ 0.04
TRIM47-206ENST00000592942 AAR2Q9Y312 384 aaKnown RBP15.27■□□□□ 0.04
TRIM47-206ENST00000592942 ZNF711Q9Y462 761 aa15.27■□□□□ 0.04
TRIM47-206ENST00000592942 ZFHX4Q86UP3 3567 aa15.27■□□□□ 0.03
TRIM47-206ENST00000592942 SPAARA0A1B0GVQ0 90 aa15.26■□□□□ 0.03
TRIM47-206ENST00000592942 RGSL1A5PLK6 1076 aa15.26■□□□□ 0.03
TRIM47-206ENST00000592942 TRIM38O00635 465 aa15.26■□□□□ 0.03
TRIM47-206ENST00000592942 ZNF189O75820 626 aaPredicted RBP15.26■□□□□ 0.03
TRIM47-206ENST00000592942 STK10O94804 968 aaKnown RBP15.26■□□□□ 0.03
TRIM47-206ENST00000592942 ETS1P14921 441 aa15.26■□□□□ 0.03
TRIM47-206ENST00000592942 TSHRP16473 764 aa15.26■□□□□ 0.03
TRIM47-206ENST00000592942 HLA-DPA1P20036 260 aa15.26■□□□□ 0.03
TRIM47-206ENST00000592942 HNRNPKP61978 463 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRIM47-206ENST00000592942 CDK3Q00526 305 aa15.26■□□□□ 0.03
TRIM47-206ENST00000592942 HENMT1Q5T8I9 393 aaKnown RBP15.26■□□□□ 0.03
TRIM47-206ENST00000592942 SLCO6A1Q86UG4 719 aa15.26■□□□□ 0.03
TRIM47-206ENST00000592942 EID2Q8N6I1 236 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms