RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 EIF3MQ7L2H7 374 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 C1orf127Q8N9H9 656 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 MAGEE2Q8TD90 523 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 UBASH3BQ8TF42 649 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TRMOQ9BU70 441 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 DGCR6LQ9BY27 220 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 KLHL1Q9NR64 748 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ZNF624Q9P2J8 865 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 BBIP1A8MTZ0 92 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 BUD23O43709 281 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 EDF1O60869 148 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ATP6V0D1P61421 351 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 CAP1Q01518 475 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 PHYKPLQ8IUZ5 450 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 PTGR2Q8N8N7 351 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 OR14C36Q8NHC7 312 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ZFP28Q8NHY6 868 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 NPLOC4Q8TAT6 608 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 SMAD5Q99717 465 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 BPIFA1Q9NP55 256 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 EHD3Q9NZN3 535 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 CPQQ9Y646 472 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 GSAPA4D1B5 854 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 RAB10P61026 200 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TRAP1Q12931 704 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ITGADQ13349 1161 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 SHDQ96IW2 340 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 FAIM2Q9BWQ8 316 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 UNC93B1Q9H1C4 597 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ALG9Q9H6U8 611 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 GPN3Q9UHW5 284 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ANGPT4Q9Y264 503 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TBC1D30Q9Y2I9 924 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 KRT36O76013 467 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 GRIA4P48058 902 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 DPYSQ14117 519 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 NRF1Q16656 503 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 PRSS55Q6UWB4 352 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 NPNTQ6UXI9 565 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 GPR135Q8IZ08 494 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 SELENOMQ8WWX9 145 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TNFRSF25Q93038 417 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TMEM175Q9BSA9 504 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TMPRSS4Q9NRS4 437 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TAS2R14Q9NYV8 317 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 GMPPBQ9Y5P6 360 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 AK5Q9Y6K8 562 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 A0A1B0GVM2 712 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 TCAF2A6NFQ2 919 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 RHOQP17081 205 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PLK1P53350 603 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 MAXP61244 160 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 KCNJ2P63252 427 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 CSNK2BP67870 215 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 RGS1Q08116 209 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 RIPK1Q13546 671 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ZNHIT3Q15649 155 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 UNC5AQ6ZN44 842 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PROSER1Q86XN7 944 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ARL14EPQ8N8R7 260 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 NACC2Q96BF6 587 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PLD4Q96BZ4 506 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 HNRNPABQ99729 332 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ACE2Q9BYF1 805 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 SEMA4BQ9NPR2 832 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PRDM8Q9NQV8 689 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 SEC24AO95486 1093 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 SLC10A3P09131 477 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ALOX5P09917 674 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 CCDC166P0CW27 439 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 UQCRBP14927 111 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 RPL17P18621 184 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PPIBP23284 216 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PSMD4P55036 377 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 NDUFAF6Q330K2 333 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 OTOP3Q7RTS5 596 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 CDH24Q86UP0 819 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 TRABD2AQ86V40 505 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 FBXO30Q8TB52 745 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 VPS45Q9NRW7 570 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 CLIC5Q9NZA1 410 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 CHKBQ9Y259 395 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ASF1AQ9Y294 204 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 STXBP5LQ9Y2K9 1186 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ARIH1Q9Y4X5 557 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 TGDSO95455 350 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 DGKGP49619 791 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 ATP12AP54707 1039 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 MAPKAPK3Q16644 382 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PTPRNQ16849 979 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PFKFB4Q16877 469 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 C16orf62Q7Z3J2 963 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 RBFAQ8N0V3 343 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 PHC3Q8NDX5 983 aa13.31□□□□□ -0.28
SMARCA4-216ENST00000591545 INTS7Q9NVH2 962 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms