RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ZBED6P86452 979 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 SLC10A7Q0GE19 358 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 CLN3Q13286 438 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 HLTFQ14527 1009 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 DPYSL2Q16555 572 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 PPP6R3Q5H9R7 873 aaPredicted RBP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 FIGNQ5HY92 759 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 RALGPS1Q5JS13 557 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 CERCAMQ5T4B2 595 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 POLNQ7Z5Q5 900 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 B3GNT8Q7Z7M8 397 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 ZNF605Q86T29 641 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 C17orf82Q86X59 251 aaPredicted RBP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 TP53INP2Q8IXH6 220 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 FBXO39Q8N4B4 442 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 FAM46DQ8NEK8 389 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 TMEM159Q96B96 161 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 TRIM11Q96F44 468 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 PDXPQ96GD0 296 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 NUDCD1Q96RS6 583 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 LGR4Q9BXB1 951 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 TEX101Q9BY14 249 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 STRADBQ9C0K7 418 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 ZWILCHQ9H900 591 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 SP110Q9HB58 689 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 FGF22Q9HCT0 170 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 MRPL47Q9HD33 250 aaKnown RBP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 CNOT8Q9UFF9 292 aaKnown RBP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 CAPN11Q9UMQ6 739 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 PPIL1Q9Y3C6 166 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 SCINQ9Y6U3 715 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 COL6A6A6NMZ7 2263 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 ATMQ13315 3056 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 CFAP46Q8IYW2 2715 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 ARHGEF17Q96PE2 2063 aaPredicted RBP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 MAFKO60675 156 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 RPLP0P05388 317 aaKnown RBP10.41□□□□□ -0.74
VPS4B-207ENST00000591519 PLA2G2AP14555 144 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 IL1R2P27930 398 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 TEAD1P28347 426 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 SLC5A2P31639 672 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 UGT1A5P35504 534 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 C14orf28Q4W4Y0 310 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 TAF1BQ53T94 588 aaPredicted RBP10.41□□□□□ -0.74
VPS4B-207ENST00000591519 SPECC1LQ69YQ0 1117 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 CCDC81Q6ZN84 652 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 TAF8Q7Z7C8 310 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 CCNJLQ8IV13 435 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 VSTM4Q8IW00 320 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 PELI3Q8N2H9 469 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 PGBD5Q8N414 524 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 GPBAR1Q8TDU6 330 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 SCRN2Q96FV2 425 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 CCNL2Q96S94 520 aaPredicted RBP10.41□□□□□ -0.74
VPS4B-207ENST00000591519 MGME1Q9BQP7 344 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 B3GNT4Q9C0J1 378 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 TMEM168Q9H0V1 697 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 MRPL40Q9NQ50 206 aaKnown RBP10.41□□□□□ -0.74
VPS4B-207ENST00000591519 LRIT1Q9P2V4 623 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 MYO1AQ9UBC5 1043 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 B4GALT6Q9UBX8 382 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 PHTF1Q9UMS5 762 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 PCDHGC4Q9Y5F7 938 aa10.41□□□□□ -0.74
VPS4B-207ENST00000591519 SCN8AQ9UQD0 1980 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 PRSS38A1L453 326 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 H3BRJ5 948 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 PSMD11O00231 422 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 HEXIM1O94992 359 aaKnown RBP10.4□□□□□ -0.74
VPS4B-207ENST00000591519 FUCA1P04066 466 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 SERPING1P05155 500 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 FGF1P05230 155 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 CEACAM5P06731 702 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 TPM1P09493 284 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 MYCLP1P12525 358 aaPredicted RBP10.4□□□□□ -0.74
VPS4B-207ENST00000591519 AMPD1P23109 780 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 NFKBIAP25963 317 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 VIPR1P32241 457 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 ARL4AP40617 200 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 B4GALNT1Q00973 533 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 PIGHQ14442 188 aaPredicted RBP10.4□□□□□ -0.74
VPS4B-207ENST00000591519 NR1D2Q14995 579 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 ACOX1Q15067 660 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 CLPPQ16740 277 aaPredicted RBP10.4□□□□□ -0.74
VPS4B-207ENST00000591519 HGSNATQ68CP4 663 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 TMCO3Q6UWJ1 677 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 XKR5Q6UX68 686 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 SPRED1Q7Z699 444 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 NLRP8Q86W28 1048 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 NRROSQ86YC3 692 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 LRRC49Q8IUZ0 686 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 TEX26Q8N6G2 289 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 NIPA2Q8N8Q9 360 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 CCL4L1Q8NHW4 92 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 TEKT4Q8WW24 435 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 ZNF653Q96CK0 615 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 SCARF2Q96GP6 870 aaPredicted RBP10.4□□□□□ -0.74
VPS4B-207ENST00000591519 CSPG4P5Q96PW8 444 aa10.4□□□□□ -0.74
VPS4B-207ENST00000591519 MCCC1Q96RQ3 725 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms