RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 OR4K2Q8NGD2 314 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 OR13C4Q8NGS5 318 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SPPL3Q8TCT6 385 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 BADQ92934 168 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CMTM5Q96DZ9 223 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CCDC106Q9BWC9 280 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 TBC1D10AQ9BXI6 508 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SLC46A2Q9BY10 475 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 SLC2A11Q9BYW1 496 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 CPEB1Q9BZB8 566 aaKnown RBP10.39□□□□□ -0.75
VPS25-203ENST00000589520 NMUR2Q9GZQ4 415 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 PNPOQ9NVS9 261 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 ZDHHC7Q9NXF8 308 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 APPL1Q9UKG1 709 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 KCTD3Q9Y597 815 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 PCDHB1Q9Y5F3 818 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 PCDHGC4Q9Y5F7 938 aa10.39□□□□□ -0.75
VPS25-203ENST00000589520 LCHNA4D1U4 455 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 SYCE1LA8MT33 242 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 H3BMM5 538 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 TK2O00142 265 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 HGSO14964 777 aaPredicted RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 CHUKO15111 745 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 MAGEC1O60732 1142 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 VPS26AO75436 327 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 CBX6O95503 412 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 ESR1P03372 595 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 IMPDH1P20839 514 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 SERPINA4P29622 427 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 NAGLUP54802 743 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 ERVFC1P60507 584 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 IRX1P78414 480 aaPredicted RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 ZXDBP98169 803 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 SATB1Q01826 763 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 CACNG1Q06432 222 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 TRAF2Q12933 501 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 DLG1Q12959 904 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 PDAP1Q13442 181 aaKnown RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 CRY1Q16526 586 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 ZNF789Q5FWF6 425 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 ARL13AQ5H913 290 aaPredicted RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 RBM20Q5T481 1227 aaKnown RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 GPR158Q5T848 1215 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 TRIM67Q6ZTA4 783 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 ALYREFQ86V81 257 aaKnown RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 LONP2Q86WA8 852 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 BBS7Q8IWZ6 715 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 SUGP1Q8IWZ8 645 aaKnown RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 TTC30BQ8N4P2 665 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 STAG3L4Q8TBR4 150 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 MICAL1Q8TDZ2 1067 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 POF1BQ8WVV4 589 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 PIH1D2Q8WWB5 315 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 L3HYPDHQ96EM0 354 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 LYSMD1Q96S90 227 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 NDNQ99608 321 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 OLFM1Q99784 485 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 GPR63Q9BZJ6 419 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 DERL2Q9GZP9 239 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 ATP13A3Q9H7F0 1226 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 ZNF395Q9H8N7 513 aaPredicted RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 COG4Q9H9E3 785 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 ARL8BQ9NVJ2 186 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 IL17CQ9P0M4 197 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 MARCH4Q9P2E8 410 aaPredicted RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 MARCOQ9UEW3 520 aaPredicted RBP10.38□□□□□ -0.75
VPS25-203ENST00000589520 SLC25A13Q9UJS0 675 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 SPO11Q9Y5K1 396 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 SLC30A1Q9Y6M5 507 aa10.38□□□□□ -0.75
VPS25-203ENST00000589520 CCL16O15467 120 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 GSC2O15499 205 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 GJB3O75712 270 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 SRP72O76094 671 aaKnown RBP10.37□□□□□ -0.75
VPS25-203ENST00000589520 RHOBTB1O94844 696 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 PIGNO95427 931 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 ATP6V1G2O95670 118 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 PDHA1P08559 390 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 KRT16P08779 473 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 PKMP14618 531 aaKnown RBP10.37□□□□□ -0.75
VPS25-203ENST00000589520 CD1DP15813 335 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 RPS3P23396 243 aaKnown RBP eCLIP10.37□□□□□ -0.757e-7■■■■■ 46
VPS25-203ENST00000589520 MC4RP32245 332 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 GLRBP48167 497 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 POLR2LP62875 67 aaKnown RBP10.37□□□□□ -0.75
VPS25-203ENST00000589520 LMAN2Q12907 356 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 TUBB3Q13509 450 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 GPR33Q49SQ1 333 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 PITRM1Q5JRX3 1037 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 C6orf163Q5TEZ5 329 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 PLPP4Q5VZY2 271 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 TXNDC11Q6PKC3 985 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 LINGO4Q6UY18 593 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 NAPRTQ6XQN6 538 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 ISCA2Q86U28 154 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 KIF2BQ8N4N8 673 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 CPSF7Q8N684 471 aaKnown RBP10.37□□□□□ -0.75
VPS25-203ENST00000589520 TEX9Q8N6V9 391 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 PCDH20Q8N6Y1 951 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms