RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 MTSS1LQ765P7 747 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 TMPRSS9Q7Z410 1059 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 RHOT2Q8IXI1 618 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 GPR65Q8IYL9 337 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ZBTB44Q8NCP5 570 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 HASPINQ8TF76 798 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 SCFD1Q8WVM8 642 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 POMGNT1Q8WZA1 660 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 FGF14Q92915 247 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 C18orf25Q96B23 403 aaPredicted RBP8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ZDHHC12Q96GR4 267 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 B3GALT6Q96L58 329 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 PPP1R10Q96QC0 940 aaKnown RBP8.01□□□□□ -1.13
ATG4D-210ENST00000588972 CBWD1Q9BRT8 395 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 TUBGCP4Q9UGJ1 667 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 AGO2Q9UKV8 859 aaKnown RBP8.01□□□□□ -1.13
ATG4D-210ENST00000588972 CDH7Q9ULB5 785 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 NDRG4Q9ULP0 352 aaKnown RBP8.01□□□□□ -1.13
ATG4D-210ENST00000588972 EXOC7Q9UPT5 735 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 STYXL1Q9Y6J8 313 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 VWA8A3KMH1 1905 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 TTC26A0AVF1 554 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 LACTBL1A8MY62 500 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 E7EVH7 732 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 CLIC2O15247 247 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 EIF3DO15371 548 aaKnown RBP eCLIP8□□□□□ -1.13
ATG4D-210ENST00000588972 ZSCAN9O15535 394 aaPredicted RBP8□□□□□ -1.13
ATG4D-210ENST00000588972 KRT38O76015 456 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 SUN1O94901 812 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 CLTAP09496 248 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 HNRNPA1P09651 372 aaKnown RBP eCLIP8□□□□□ -1.13
ATG4D-210ENST00000588972 SLURP1P55000 103 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 UBE2HP62256 183 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 GPC5P78333 572 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 MC2RQ01718 297 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 USP41Q3LFD5 358 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 FAM102AQ5T9C2 384 aaPredicted RBP8□□□□□ -1.13
ATG4D-210ENST00000588972 ARMCX5Q6P1M9 558 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 PARM1Q6UWI2 310 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 CRELD2Q6UXH1 353 aaPredicted RBP8□□□□□ -1.13
ATG4D-210ENST00000588972 ARHGEF18Q6ZSZ5 1173 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 STXBP4Q6ZWJ1 553 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 PALB2Q86YC2 1186 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 ABHD5Q8WTS1 349 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 WDR60Q8WVS4 1066 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 GOLGA1Q92805 767 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 NELL1Q92832 810 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 FAM84AQ96KN4 292 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 FAM213AQ9BRX8 229 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 TMEM206Q9H813 350 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 CHODLQ9H9P2 273 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 LTB4R2Q9NPC1 389 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 PRMT8Q9NR22 394 aaPredicted RBP8□□□□□ -1.13
ATG4D-210ENST00000588972 IRAK4Q9NWZ3 460 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 PLA2G3Q9NZ20 509 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 FBXW11Q9UKB1 542 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 GMEB2Q9UKD1 530 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 CPSF3Q9UKF6 684 aaKnown RBP8□□□□□ -1.13
ATG4D-210ENST00000588972 CNTN6Q9UQ52 1028 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 ANKRD11Q6UB99 2663 aaPredicted RBP8□□□□□ -1.13
ATG4D-210ENST00000588972 UBE4BO95155 1302 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 FRYQ5TBA9 3013 aa8□□□□□ -1.13
ATG4D-210ENST00000588972 F5P12259 2224 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 ZFYVE26Q68DK2 2539 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 TSC2P49815 1807 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 A6NCN8 305 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 NOBOXO60393 691 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 ITGALP20701 1170 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 NTSR1P30989 418 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 RPS9P46781 194 aaKnown RBP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 CYP2J2P51589 502 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 IRAK1P51617 712 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 CLCNKBP51801 687 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 PPP2CBP62714 309 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 PPP2CAP67775 309 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 SMAD1Q15797 465 aaKnown RBP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 XKR4Q5GH76 650 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 DCAF17Q5H9S7 520 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 LIN9Q5TKA1 542 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 ISM2Q6H9L7 571 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 JADE1Q6IE81 842 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 FUT10Q6P4F1 479 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 TAX1BP1Q86VP1 789 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 CBWD2Q8IUF1 395 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 MBD3L2Q8NHZ7 208 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 TMEM171Q8WVE6 324 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 CENPIQ92674 756 aaPredicted RBP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 CLDN23Q96B33 292 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 DOCK6Q96HP0 2047 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 TIGD1Q96MW7 591 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 OR14A2Q96R54 314 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 NUDT22Q9BRQ3 303 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 RPP25Q9BUL9 199 aaKnown RBP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 GPR63Q9BZJ6 419 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 BRD8Q9H0E9 1235 aa7.99□□□□□ -1.13
ATG4D-210ENST00000588972 RPF1Q9H9Y2 349 aaKnown RBP7.99□□□□□ -1.13
ATG4D-210ENST00000588972 PREBQ9HCU5 417 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms