RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ETV3P41162 512 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 ILF3Q12906 894 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC43-204ENST00000588687 TRAF2Q12933 501 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 PTPRRQ15256 657 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 AMZ1Q400G9 498 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 HSD11B1LQ7Z5J1 315 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 PSTKQ8IV42 348 aaKnown RBP18.4■□□□□ 0.54
CCDC43-204ENST00000588687 FNIP1Q8TF40 1166 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 SCARF2Q96GP6 870 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-204ENST00000588687 MGME1Q9BQP7 344 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 ARHGAP9Q9BRR9 750 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 GSDMCQ9BYG8 508 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 PHPT1Q9NRX4 125 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-204ENST00000588687 PARVAQ9NVD7 372 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 MOSPD1Q9UJG1 213 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 PCDHGC4Q9Y5F7 938 aa18.4■□□□□ 0.54
CCDC43-204ENST00000588687 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.39■□□□□ 0.53
CCDC43-204ENST00000588687 PPM1DO15297 605 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 CPP00450 1065 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 THRAP10827 490 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 FERP16591 822 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 GPR3P46089 330 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 GNPDA1P46926 289 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 HCAR3P49019 387 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 LIMK2P53671 638 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 UBXN1Q04323 297 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 SQSTM1Q13501 440 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 NCAPHQ15003 741 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 PPP6R3Q5H9R7 873 aaPredicted RBP18.39■□□□□ 0.53
CCDC43-204ENST00000588687 ATG14Q6ZNE5 492 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 NKD1Q969G9 470 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 NUDCD1Q96RS6 583 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 SUDS3Q9H7L9 328 aaPredicted RBP18.39■□□□□ 0.53
CCDC43-204ENST00000588687 LMBRD1Q9NUN5 540 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 ETNK2Q9NVF9 386 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 GEMIN8Q9NWZ8 242 aaKnown RBP18.39■□□□□ 0.53
CCDC43-204ENST00000588687 PCDHB11Q9Y5F2 797 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 DOPEY2Q9Y3R5 2298 aa18.39■□□□□ 0.53
CCDC43-204ENST00000588687 IGHV1OR21-1A0A087WYE8 117 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 RHPN2P1A8MT19 583 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 PSMD11O00231 422 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 IVLP07476 585 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 ATP1A3P13637 1013 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 TNFAIP3P21580 790 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 IL1R2P27930 398 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 ALDH4A1P30038 563 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 POLD2P49005 469 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 RENBPP51606 427 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 CTBSQ01459 385 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 MYL5Q02045 173 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 E4F1Q66K89 784 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-204ENST00000588687 SLC30A9Q6PML9 568 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 Q6ZVL8 140 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 TSPAN33Q86UF1 283 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 OR4D9Q8NGE8 314 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 JPH3Q8WXH2 748 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-204ENST00000588687 PCMTD1Q96MG8 357 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-204ENST00000588687 NOD2Q9HC29 1040 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 TMEM9Q9P0T7 183 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 NBASA2RRP1 2371 aa18.38■□□□□ 0.53
CCDC43-204ENST00000588687 NBPF19A0A087WUL8 3843 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 TMCO5BA8MYB1 307 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 DAPK3O43293 454 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 MAFKO60675 156 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 SFTPCP11686 197 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 TCF4P15884 667 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 DESP17661 470 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 HSPA9P38646 679 aaKnown RBP18.37■□□□□ 0.53
CCDC43-204ENST00000588687 ADCY8P40145 1251 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 ZNF135P52742 658 aaPredicted RBP18.37■□□□□ 0.53
CCDC43-204ENST00000588687 DPTQ07507 201 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 TRA2AQ13595 282 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCDC43-204ENST00000588687 DPYSL2Q16555 572 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 TMEM164Q5U3C3 297 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 NKAIN2Q5VXU1 208 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 CLEC17AQ6ZS10 378 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 RFLNAQ6ZTI6 216 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 TECPR1Q7Z6L1 1165 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 BMPERQ8N8U9 685 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 ZSCAN1Q8NBB4 408 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 TAAR9Q96RI9 348 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 SLC25A18Q9H1K4 315 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 KCTD5Q9NXV2 234 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 PPIL1Q9Y3C6 166 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 PLEKHM1Q9Y4G2 1056 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 B3GALT1Q9Y5Z6 326 aa18.37■□□□□ 0.53
CCDC43-204ENST00000588687 A0A0U1RQS6 177 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 A0A1W2PQ67 120 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 PRPSAP2O60256 369 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 PPFIA2O75334 1257 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 PGLSO95336 258 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 LIFP15018 202 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 UGT1A3P35503 534 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 SRSF1Q07955 248 aaKnown RBP eCLIP18.36■□□□□ 0.53
CCDC43-204ENST00000588687 ZNF235Q14590 738 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 DENND2CQ68D51 928 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 LZTR1Q8N653 840 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 SCRN2Q96FV2 425 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 DDA1Q9BW61 102 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 AKAP7Q9P0M2 348 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms