RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 PTPRRQ15256 657 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 TMCO3Q6UWJ1 677 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 HSD11B1LQ7Z5J1 315 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 PSTKQ8IV42 348 aaKnown RBP16.79■□□□□ 0.28
LINC01842-201ENST00000588275 PGBD5Q8N414 524 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 ATPAF2Q8N5M1 289 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 FNIP1Q8TF40 1166 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 NSMCE1Q8WV22 266 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 PTCD2Q8WV60 388 aaKnown RBP16.79■□□□□ 0.28
LINC01842-201ENST00000588275 DTD2Q96FN9 168 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 NUDCD1Q96RS6 583 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 HSD3B7Q9H2F3 369 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 NOD2Q9HC29 1040 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 ETNK2Q9NVF9 386 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 CD84Q9UIB8 345 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 MYO6Q9UM54 1294 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 A0A1W2PQ67 120 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 NPIPB15A6NHN6 443 aaPredicted RBP16.78■□□□□ 0.28
LINC01842-201ENST00000588275 ZW10O43264 779 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 HTRA2O43464 458 aaPredicted RBP16.78■□□□□ 0.28
LINC01842-201ENST00000588275 FAM87AP0C7U9 286 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 CCL4P13236 92 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 CTPS1P17812 591 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 LHCGRP22888 699 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 HCAR3P49019 387 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 NKAIN2Q5VXU1 208 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 Q6ZVL8 140 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
LINC01842-201ENST00000588275 TSPAN33Q86UF1 283 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 COL26A1Q96A83 441 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 CCDC74BQ96LY2 380 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 TEX101Q9BY14 249 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 FRMD8Q9BZ67 464 aaPredicted RBP16.78■□□□□ 0.28
LINC01842-201ENST00000588275 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC01842-201ENST00000588275 TRNAU1APQ9NX07 287 aaKnown RBP16.78■□□□□ 0.28
LINC01842-201ENST00000588275 KCTD5Q9NXV2 234 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 PHTF1Q9UMS5 762 aa16.78■□□□□ 0.28
LINC01842-201ENST00000588275 A0A0U1RQS6 177 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 A0A1W2PQC6 194 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 WISP1O95388 367 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 FUCA1P04066 466 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 ITGB2P05107 769 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 TCF4P15884 667 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 WT1P19544 449 aaPredicted RBP16.77■□□□□ 0.28
LINC01842-201ENST00000588275 CR2P20023 1033 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 MPSTP25325 297 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 CD82P27701 267 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 IL1R2P27930 398 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 ACTR1BP42025 376 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 MMP13P45452 471 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 GPR1P46091 355 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 ACTR1AP61163 376 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 CTBSQ01459 385 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 ARMC12Q5T9G4 340 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 E4F1Q66K89 784 aaPredicted RBP16.77■□□□□ 0.28
LINC01842-201ENST00000588275 CLEC17AQ6ZS10 378 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 USP45Q70EL2 814 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 GBP4Q96PP9 640 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 MGME1Q9BQP7 344 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 MRPL47Q9HD33 250 aaKnown RBP16.77■□□□□ 0.28
LINC01842-201ENST00000588275 PLEKHM1Q9Y4G2 1056 aa16.77■□□□□ 0.28
LINC01842-201ENST00000588275 IGHV5-10-1A0A0J9YXX1 117 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 STMND1H3BQB6 276 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 DDX3XO00571 662 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01842-201ENST00000588275 MAFKO60675 156 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 PGLSO95336 258 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 PEX11BO96011 259 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 GZMAP12544 262 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 SKILP12757 684 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 ADCY8P40145 1251 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 ITKQ08881 620 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 KLHL30Q0D2K2 578 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 DPYSL2Q16555 572 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 TBR1Q16650 682 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 MARC1Q5VT66 337 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 ZNF574Q6ZN55 896 aaPredicted RBP16.76■□□□□ 0.27
LINC01842-201ENST00000588275 MARK2Q7KZI7 788 aaKnown RBP16.76■□□□□ 0.27
LINC01842-201ENST00000588275 ZNF438Q7Z4V0 828 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 POLNQ7Z5Q5 900 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 TRIM74Q86UV6 250 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 C17orf82Q86X59 251 aaPredicted RBP16.76■□□□□ 0.27
LINC01842-201ENST00000588275 DTX1Q86Y01 620 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 NAGSQ8N159 534 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01842-201ENST00000588275 PMEPA1Q969W9 287 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 TRIM11Q96F44 468 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 CSPG4P5Q96PW8 444 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 CDH19Q9H159 772 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 NT5MQ9NPB1 228 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
LINC01842-201ENST00000588275 TMEM98Q9Y2Y6 226 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 SDK2Q58EX2 2172 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 BOD1L1Q8NFC6 3051 aa16.76■□□□□ 0.27
LINC01842-201ENST00000588275 PSMD11O00231 422 aa16.75■□□□□ 0.27
LINC01842-201ENST00000588275 HGSO14964 777 aaPredicted RBP16.75■□□□□ 0.27
LINC01842-201ENST00000588275 CD1CP29017 333 aa16.75■□□□□ 0.27
LINC01842-201ENST00000588275 SERPINB6P35237 376 aa16.75■□□□□ 0.27
LINC01842-201ENST00000588275 PCK1P35558 622 aa16.75■□□□□ 0.27
LINC01842-201ENST00000588275 ATP1A2P50993 1020 aa16.75■□□□□ 0.27
LINC01842-201ENST00000588275 TYRO3Q06418 890 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms