RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 UBXN4Q92575 508 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 FICDQ9BVA6 458 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 TSPYL1Q9H0U9 437 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 KDM4CQ9H3R0 1056 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 TRABDQ9H4I3 376 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 ARNT2Q9HBZ2 717 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 TM7SF3Q9NS93 570 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 ANAPC5Q9UJX4 755 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 CHKBQ9Y259 395 aa16.14■□□□□ 0.17
ATG4D-205ENST00000586477 ARID1BQ8NFD5 2236 aaPredicted RBP16.14■□□□□ 0.17
ATG4D-205ENST00000586477 ANKRD36A6QL64 1941 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3DA0A087WVF3 549 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3IA0A087WXS9 549 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3EA0A087X179 549 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3KA0A087X1G2 549 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TTC24A2A3L6 582 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3FA6NER0 549 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-205ENST00000586477 ANKRD66B4E2M5 251 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3LB9A6J9 549 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 F5H423 210 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-205ENST00000586477 VILLO15195 856 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 CER1O95813 267 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TUBBP07437 444 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3HP0C7X1 549 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 ADRB3P13945 408 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 SPINK2P20155 84 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 ADRA1AP35348 466 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 PDE1BQ01064 536 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 GUCY2DQ02846 1103 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 CUL1Q13616 776 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 SHBQ15464 509 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 RNASEH2BQ5TBB1 312 aaKnown RBP16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3GQ6DHY5 549 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3CQ6IPX1 549 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 IL27RAQ6UWB1 636 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TRIM69Q86WT6 500 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TBC1D3Q8IZP1 549 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-205ENST00000586477 LPCAT1Q8NF37 534 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 SEC14L1Q92503 715 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 CPT1BQ92523 772 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TRIB3Q96RU7 358 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 GORASP1Q9BQQ3 440 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 FOXP3Q9BZS1 431 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 TRIM31Q9BZY9 425 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 PCOLCE2Q9UKZ9 415 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 BTBD3Q9Y2F9 522 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 PPIL1Q9Y3C6 166 aa16.13■□□□□ 0.17
ATG4D-205ENST00000586477 IGF2RP11717 2491 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 A0A0J9YYE9 177 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 RIOK3O14730 519 aaKnown RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 AP1G1O43747 822 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 TRBC1P01850 177 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 ZNF30P17039 623 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 IVDP26440 423 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 MAT2AP31153 395 aaKnown RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 RPL21P46778 160 aaKnown RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 SIM1P81133 766 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 TEAD4Q15561 434 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 PRAMEF14Q5SWL7 426 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 NEK5Q6P3R8 708 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 LRRC8BQ6P9F7 803 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 PARS2Q7L3T8 475 aaKnown RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 RAVER1Q8IY67 606 aaKnown RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 PDIK1LQ8N165 341 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 NAT8LQ8N9F0 302 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 EIF1ADQ8N9N8 165 aaKnown RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 PIH1D2Q8WWB5 315 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 SCRN2Q96FV2 425 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 SERAC1Q96JX3 654 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 DPH5Q9H2P9 285 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 MAGEE1Q9HCI5 957 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 BFARQ9NZS9 450 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 MTRF1LQ9UGC7 380 aaKnown RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 ZFR2Q9UPR6 939 aaKnown RBP16.12■□□□□ 0.17
ATG4D-205ENST00000586477 CA5BQ9Y2D0 317 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 SNX24Q9Y343 169 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 PCDHGB2Q9Y5G2 931 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 ZZEF1O43149 2961 aa16.12■□□□□ 0.17
ATG4D-205ENST00000586477 CAPN8A6NHC0 703 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 NEMP1O14524 444 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 SPINT1O43278 529 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 TSPAN6O43657 245 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 RNGTTO60942 597 aaKnown RBP16.11■□□□□ 0.17
ATG4D-205ENST00000586477 NPY2RP49146 381 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 ITGA8P53708 1063 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 SLC7A5Q01650 507 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 ARHGEF7Q14155 803 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 DNAJC21Q5F1R6 531 aaKnown RBP16.11■□□□□ 0.17
ATG4D-205ENST00000586477 SIRPB2Q5JXA9 342 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 HIBCHQ6NVY1 386 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-205ENST00000586477 KDELC2Q7Z4H8 507 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 SPATS2Q86XZ4 545 aaKnown RBP16.11■□□□□ 0.17
ATG4D-205ENST00000586477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATG4D-205ENST00000586477 MCCC1Q96RQ3 725 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-205ENST00000586477 LYSMD1Q96S90 227 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 TMEM121BQ9BXQ6 578 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-205ENST00000586477 PHACTR1Q9C0D0 580 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 IL22Q9GZX6 179 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 EPB41L5Q9HCM4 733 aa16.11■□□□□ 0.17
ATG4D-205ENST00000586477 PREBQ9HCU5 417 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms