RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 DCTN3O75935 186 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 CA5AP35218 305 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 ABCE1P61221 599 aaKnown RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 RALGDSQ12967 914 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 PABPC1LQ4VXU2 614 aaKnown RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 FAM26DQ5JW98 314 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 LRRC8EQ6NSJ5 796 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 FAM180BQ6P0A1 224 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 C6orf89Q6UWU4 347 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 DPY19L3Q6ZPD9 716 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 ADGRG2Q8IZP9 1017 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 LZTR1Q8N653 840 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 RBM15BQ8NDT2 890 aaKnown RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 OR13J1Q8NGT2 312 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 FAXDC2Q96IV6 333 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 ZFP14Q9HCL3 533 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 CYLDQ9NQC7 956 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 NKX1-2Q9UD57 310 aaPredicted RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 RAD54BQ9Y620 910 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 TBC1D4O60343 1298 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 CCNT2O60583 730 aaKnown RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 PRAMEF1O95521 474 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 TIMP1P01033 207 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 FGF3P11487 239 aaPredicted RBP10.28□□□□□ -0.76
RFFL-212ENST00000584655 ETV4P43268 484 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 FPGSQ05932 587 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 SCAPQ12770 1279 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 KLC3Q6P597 504 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 RANBP10Q6VN20 620 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 GK5Q6ZS86 529 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 FRMD1Q8N878 549 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 ARRDC2Q8TBH0 407 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 EEF1AKMT1Q8WVE0 214 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 WDR60Q8WVS4 1066 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 MCOLN1Q9GZU1 580 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 PFDN4Q9NQP4 134 aa10.28□□□□□ -0.76
RFFL-212ENST00000584655 TIMM44O43615 452 aa10.27□□□□□ -0.76
RFFL-212ENST00000584655 TYRP14679 529 aa10.27□□□□□ -0.76
RFFL-212ENST00000584655 HLA-FP30511 346 aa10.27□□□□□ -0.76
RFFL-212ENST00000584655 TMEM135Q86UB9 458 aa10.27□□□□□ -0.76
RFFL-212ENST00000584655 RNF175Q8N4F7 328 aa10.27□□□□□ -0.76
RFFL-212ENST00000584655 RHOJQ9H4E5 214 aa10.27□□□□□ -0.76
RFFL-212ENST00000584655 OLA1Q9NTK5 396 aaKnown RBP10.27□□□□□ -0.76
RFFL-212ENST00000584655 DCDC2Q9UHG0 476 aa10.27□□□□□ -0.76
RFFL-212ENST00000584655 FAM186AA6NE01 2351 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 PRRC2CQ9Y520 2896 aaKnown RBP10.27□□□□□ -0.77
RFFL-212ENST00000584655 TRAV19A0A0A6YYK7 116 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 BAIAP3O94812 1187 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 NELFEP18615 380 aaKnown RBP10.27□□□□□ -0.77
RFFL-212ENST00000584655 RCN1Q15293 331 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 SF1Q15637 639 aaKnown RBP10.27□□□□□ -0.77
RFFL-212ENST00000584655 AGKQ53H12 422 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 MSANTD2Q6P1R3 559 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 HPS6Q86YV9 775 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 CENPLQ8N0S6 344 aaPredicted RBP10.27□□□□□ -0.77
RFFL-212ENST00000584655 LINGO1Q96FE5 620 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 SPATA16Q9BXB7 569 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 ILKAPQ9H0C8 392 aaPredicted RBP10.27□□□□□ -0.77
RFFL-212ENST00000584655 THEGQ9P2T0 379 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 PSMD13Q9UNM6 376 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 WASF2Q9Y6W5 498 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 SERPINE1P05121 402 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 HNF4AP41235 474 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
RFFL-212ENST00000584655 FOXA1P55317 472 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 ABRQ12979 859 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 CYTH1Q15438 398 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 AAK1Q2M2I8 961 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 ARSIQ5FYB1 569 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 DGKKQ5KSL6 1271 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 MRNIPQ6NTE8 343 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 CRTC3Q6UUV7 619 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 Q6ZVL8 140 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 TEX9Q8N6V9 391 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 LRRC39Q96DD0 335 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 RTP4Q96DX8 246 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 SPDL1Q96EA4 605 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 IMP4Q96G21 291 aaKnown RBP10.27□□□□□ -0.77
RFFL-212ENST00000584655 ZNF333Q96JL9 665 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 FEM1CQ96JP0 617 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 LENG8Q96PV6 779 aaPredicted RBP10.27□□□□□ -0.77
RFFL-212ENST00000584655 IL12RB2Q99665 862 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 CACNA2D2Q9NY47 1150 aa10.27□□□□□ -0.77
RFFL-212ENST00000584655 H3BMM5 538 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 H3BQ06 376 aaPredicted RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 PRAMEF11O60813 436 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 MMP2P08253 660 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 DLDP09622 509 aaKnown RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 LAG3P18627 525 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 CRHR1P34998 444 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 MCCD1P59942 119 aaPredicted RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 CDK16Q00536 496 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 SLC8B1Q6J4K2 584 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 FBXO46Q6PJ61 603 aaPredicted RBP10.26□□□□□ -0.77
RFFL-212ENST00000584655 CENPTQ96BT3 561 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 KXD1Q9BQD3 176 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 WWP1Q9H0M0 922 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 SLC6A17Q9H1V8 727 aa10.26□□□□□ -0.77
RFFL-212ENST00000584655 TCF7L2Q9NQB0 619 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms