RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 PDCD2LQ9BRP1 358 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 PCDHGA6Q9Y5G7 932 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 CLDN4O14493 209 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 TSPAN1O60635 241 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 PIAS1O75925 651 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 PROCP04070 461 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 CCKBRP32239 447 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 NFATC2Q13469 925 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 NEPROQ6NW34 567 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 BEND4Q6ZU67 534 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 MCOLN2Q8IZK6 566 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 EFHD2Q96C19 240 aaPredicted RBP11.3□□□□□ -0.6
MSI2-217ENST00000583705 NMUR1Q9HB89 426 aa11.3□□□□□ -0.6
MSI2-217ENST00000583705 KIAA1522Q9P206 1035 aaPredicted RBP11.3□□□□□ -0.6
MSI2-217ENST00000583705 SAMHD1Q9Y3Z3 626 aaKnown RBP11.3□□□□□ -0.6
MSI2-217ENST00000583705 OTOL1A6NHN0 477 aaPredicted RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 PGRMC2O15173 223 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 GRM6O15303 877 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SERPINB7O75635 380 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 TGFB3P10600 412 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 DDX6P26196 483 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSI2-217ENST00000583705 LSM12Q3MHD2 195 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 SPESP1Q6UW49 350 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 CENPSQ8N2Z9 138 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 FTHL17Q9BXU8 183 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 ELAC1Q9H777 363 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 ACSS2Q9NR19 701 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 DNAJC28Q9NX36 388 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 NUP50Q9UKX7 468 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 A0A1W2PQ72 361 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 MSI1O43347 362 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 OR1F1O43749 312 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 AKAP3O75969 853 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 MAGP20916 626 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SEMG2Q02383 582 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 CERCAMQ5T4B2 595 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 MLIPQ5VWP3 458 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 ZDHHC17Q8IUH5 632 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 C4orf19Q8IY42 314 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SLC25A36Q96CQ1 311 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 BRF2Q9HAW0 419 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SHROOM2Q13796 1616 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SLC33A1O00400 549 aaPredicted RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 CABYRO75952 493 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 TRUB2O95900 331 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 LTA4HP09960 611 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 NUDT17P0C025 328 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 FLT3LGP49771 235 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SPIRE1Q08AE8 756 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 LYPLAL1Q5VWZ2 237 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SULT1C3Q6IMI6 304 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 C1orf94Q6P1W5 598 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 HFE2Q6ZVN8 426 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SLC43A3Q8NBI5 491 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 DENND6BQ8NEG7 585 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 COX4I2Q96KJ9 171 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 C9orf16Q9BUW7 83 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 A0A1W2PQH9 124 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 ARL5CA6NH57 179 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 ARHGEF33A8MVX0 844 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 KHNYNO15037 678 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 PTPN9P43378 593 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 BRCC3P46736 316 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 PTGES3Q15185 160 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 KCTD19Q17RG1 926 aaPredicted RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 RGMBQ6NW40 437 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 ZNF571Q7Z3V5 609 aaPredicted RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 PSTKQ8IV42 348 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 Q96MT0 163 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 KLHL5Q96PQ7 755 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 ATP6AP2A0A1C7CYW4 349 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 TISP43B9A030 160 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 ATP6AP2O75787 350 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 PRH1P02810 166 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 HSPB3Q12988 150 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 CTBP1Q13363 440 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 PERM1Q5SV97 790 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 METTL3Q86U44 580 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 OR2AJ1Q8NGZ0 328 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SLC47A1Q96FL8 570 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 TBC1D30Q9Y2I9 924 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 TMEM88BA6NKF7 163 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 FAM227AF5H4B4 570 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 TFEBP19484 476 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 EIF1AXP47813 144 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 GMFBP60983 142 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 ECH1Q13011 328 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SLC34A3Q8N130 599 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 UROC1Q96N76 676 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
MSI2-217ENST00000583705 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
MSI2-217ENST00000583705 BANF1O75531 89 aa11.28□□□□□ -0.6
MSI2-217ENST00000583705 BNIP1Q12981 228 aa11.28□□□□□ -0.6
MSI2-217ENST00000583705 IL18Q14116 193 aa11.28□□□□□ -0.6
MSI2-217ENST00000583705 PUM1Q14671 1186 aaKnown RBP eCLIP11.28□□□□□ -0.6
MSI2-217ENST00000583705 TC2NQ8N9U0 490 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms