RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 NOP2P46087 812 aaKnown RBP12.29□□□□□ -0.44
TOP3A-215ENST00000583328 TPM4P67936 248 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 GPLD1P80108 840 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 CTBSQ01459 385 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 BCL2L1Q07817 233 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 ABHD18Q0P651 414 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 KRT31Q15323 416 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 VWA3BQ502W6 1294 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 FHL5Q5TD97 284 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 SCYL2Q6P3W7 929 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 CEACAM20Q6UY09 585 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 DPPA4Q7L190 304 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 TIPARPQ7Z3E1 657 aaKnown RBP12.29□□□□□ -0.44
TOP3A-215ENST00000583328 STARD8Q92502 1023 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 CENPIQ92674 756 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-215ENST00000583328 SPRY4Q9C004 299 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 LIMA1Q9UHB6 759 aaKnown RBP12.29□□□□□ -0.44
TOP3A-215ENST00000583328 SUFUQ9UMX1 484 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 FHOD1Q9Y613 1164 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 CREBBPQ92793 2442 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 CHD5Q8TDI0 1954 aa12.29□□□□□ -0.44
TOP3A-215ENST00000583328 LRRK1Q38SD2 2015 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 SPTBN1Q01082 2364 aaKnown RBP12.28□□□□□ -0.44
TOP3A-215ENST00000583328 MYO9AB2RTY4 2548 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 ENO4A6NNW6 628 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 WASH4PA8MWX3 477 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 GOLGA6L19H0YKK7 550 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 MKRN2OSH3BPM6 223 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 VPS4BO75351 444 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 PALMO75781 387 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 KRT3P12035 628 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 GM2AP17900 193 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 NR1D1P20393 614 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 ACTR1BP42025 376 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 RGRP47804 291 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 CSNK1DP48730 415 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 COPB1P53618 953 aaKnown RBP12.28□□□□□ -0.44
TOP3A-215ENST00000583328 ACTR1AP61163 376 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 MC2RQ01718 297 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 MIIPQ5JXC2 388 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 ATP1A1-AS1Q5TC04 95 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 KLHDC7AQ5VTJ3 777 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 LUZP1Q86V48 1076 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 HEATR4Q86WZ0 1026 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 UMODL1-AS1Q8N2C9 162 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 BMPERQ8N8U9 685 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 TSEN2Q8NCE0 465 aaKnown RBP12.28□□□□□ -0.44
TOP3A-215ENST00000583328 OR10G6Q8NH81 332 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 NUS1Q96E22 293 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 SLC38A3Q99624 504 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 C11orf70Q9BRQ4 267 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 ZPBPQ9BS86 351 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 TEX101Q9BY14 249 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 FRMD8Q9BZ67 464 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-215ENST00000583328 TRIT1Q9H3H1 467 aaKnown RBP12.28□□□□□ -0.44
TOP3A-215ENST00000583328 NDST4Q9H3R1 872 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 PDFQ9HBH1 243 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 TAB2Q9NYJ8 693 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 VPS4AQ9UN37 437 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 KCTD3Q9Y597 815 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 ICE1Q9Y2F5 2266 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 NBPF19A0A087WUL8 3843 aa12.28□□□□□ -0.44
TOP3A-215ENST00000583328 ARHGEF17Q96PE2 2063 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-215ENST00000583328 TRBV23OR9-2A0A075B6M9 112 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 GOLGA6CA6NDK9 693 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 GOLGA6BA6NDN3 693 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.45
TOP3A-215ENST00000583328 PRAMEF11O60813 436 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 STK17BO94768 372 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 GOLGA6DP0CG33 693 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 ATP1A3P13637 1013 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 GPD1P21695 349 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 MMP8P22894 467 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 ADCY8P40145 1251 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 POLD2P49005 469 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 DENND2CQ68D51 928 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 TCTN3Q6NUS6 607 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 DPY19L2P1Q6NXN4 242 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 ZNF761Q86XN6 746 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-215ENST00000583328 EFCAB3Q8N7B9 438 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 SLC30A5Q8TAD4 765 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 EPS8L1Q8TE68 723 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 PTCD2Q8WV60 388 aaKnown RBP12.27□□□□□ -0.45
TOP3A-215ENST00000583328 ECHDC3Q96DC8 303 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 CELF6Q96J87 481 aaKnown RBP12.27□□□□□ -0.45
TOP3A-215ENST00000583328 COQ10AQ96MF6 247 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 ANP32EQ9BTT0 268 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 SELENOOQ9BVL4 669 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 CINPQ9BW66 212 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-215ENST00000583328 VPS16Q9H269 839 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 PRDM8Q9NQV8 689 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 KCTD5Q9NXV2 234 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 GOLGA6AQ9NYA3 693 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 DONSONQ9NYP3 566 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 PDP2Q9P2J9 529 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 B4GALT6Q9UBX8 382 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 PLEKHM1Q9Y4G2 1056 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 PCDHB3Q9Y5E6 796 aa12.27□□□□□ -0.45
TOP3A-215ENST00000583328 ARHGAP42A6NI28 874 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms