RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 PAF1Q8N7H5 531 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 ZNF564Q8TBZ8 553 aaPredicted RBP13.57□□□□□ -0.24
SS18-222ENST00000582792 CCDC74BQ96LY2 380 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 COQ10AQ96MF6 247 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 MCEEQ96PE7 176 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 CNPY3Q9BT09 278 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 CINPQ9BW66 212 aaPredicted RBP13.57□□□□□ -0.24
SS18-222ENST00000582792 GSDMCQ9BYG8 508 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 CDH19Q9H159 772 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 CARS2Q9HA77 564 aaKnown RBP13.57□□□□□ -0.24
SS18-222ENST00000582792 TAAR2Q9P1P5 351 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 SEPT3Q9UH03 358 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 TEX15Q9BXT5 2789 aa13.57□□□□□ -0.24
SS18-222ENST00000582792 UTP20O75691 2785 aaKnown RBP13.56□□□□□ -0.24
SS18-222ENST00000582792 A8MX80 341 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 ECEL1O95672 775 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 FUCA1P04066 466 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 CEACAM5P06731 702 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 UGT1A3P35503 534 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 LIMK2P53671 638 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 KCNAB2Q13303 367 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 RFTN1Q14699 578 aaPredicted RBP13.56□□□□□ -0.24
SS18-222ENST00000582792 PPP1R15BQ5SWA1 713 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 IL22RA1Q8N6P7 574 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 OR4D9Q8NGE8 314 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 PMEPA1Q969W9 287 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 NUS1Q96E22 293 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 TEX101Q9BY14 249 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 SUDS3Q9H7L9 328 aaPredicted RBP13.56□□□□□ -0.24
SS18-222ENST00000582792 PHPT1Q9NRX4 125 aaPredicted RBP13.56□□□□□ -0.24
SS18-222ENST00000582792 TRNAU1APQ9NX07 287 aaKnown RBP13.56□□□□□ -0.24
SS18-222ENST00000582792 B4GALT6Q9UBX8 382 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 TUBD1Q9UJT1 453 aa13.56□□□□□ -0.24
SS18-222ENST00000582792 LUC7L2Q9Y383 392 aaKnown RBP13.56□□□□□ -0.24
SS18-222ENST00000582792 LRRC53A6NM62 1247 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 GYPCP04921 128 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 TPM1P09493 284 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 LIFP15018 202 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 AK4P27144 223 aaPredicted RBP13.55□□□□□ -0.24
SS18-222ENST00000582792 HNRNPH3P31942 346 aaKnown RBP13.55□□□□□ -0.24
SS18-222ENST00000582792 ZNF75DP51815 510 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 POLE2P56282 527 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 AP1S1P61966 158 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 SQSTM1Q13501 440 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 ASIC2Q16515 512 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 PPP1R2P3Q6NXS1 205 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 HEATR4Q86WZ0 1026 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 PTRH1Q86Y79 214 aaKnown RBP13.55□□□□□ -0.24
SS18-222ENST00000582792 ARHGAP12Q8IWW6 846 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 NAGSQ8N159 534 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 AGBL5Q8NDL9 886 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 PATE1Q8WXA2 126 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 NSMCE3Q96MG7 304 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 DDA1Q9BW61 102 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 FRMD8Q9BZ67 464 aaPredicted RBP13.55□□□□□ -0.24
SS18-222ENST00000582792 EPN3Q9H201 632 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 SP110Q9HB58 689 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 GPATCH2LQ9NWQ4 482 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 KCTD5Q9NXV2 234 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 ANKMY1Q9P2S6 941 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 SUFUQ9UMX1 484 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 AP4E1Q9UPM8 1137 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 B3GALT1Q9Y5Z6 326 aa13.55□□□□□ -0.24
SS18-222ENST00000582792 BZW2Q9Y6E2 419 aaKnown RBP13.55□□□□□ -0.24
SS18-222ENST00000582792 IGHV1OR21-1A0A087WYE8 117 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 EIF3CLB5ME19 914 aaKnown RBP13.54□□□□□ -0.24
SS18-222ENST00000582792 EEF2KO00418 725 aaKnown RBP13.54□□□□□ -0.24
SS18-222ENST00000582792 PPM1DO15297 605 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 THRAP10827 490 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 DESP17661 470 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 CSF2RBP32927 897 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 CSTF2P33240 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
SS18-222ENST00000582792 GNPDA1P46926 289 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 SCNN1BP51168 640 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 OGDHQ02218 1023 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 IL10RBQ08334 325 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 TBX2Q13207 712 aaPredicted RBP13.54□□□□□ -0.24
SS18-222ENST00000582792 BIRC2Q13490 618 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 PEX6Q13608 980 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 CNGA3Q16281 694 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 CA9Q16790 459 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 NKAIN2Q5VXU1 208 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 DCUN1D2Q6PH85 259 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 SLC30A9Q6PML9 568 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 CACNA2D3Q8IZS8 1091 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
SS18-222ENST00000582792 ART4Q93070 314 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 CATSPER2Q96P56 530 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 EIF3CQ99613 913 aaKnown RBP13.54□□□□□ -0.24
SS18-222ENST00000582792 DPYSL5Q9BPU6 564 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 SYT11Q9BT88 431 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 ASPSCR1Q9BZE9 553 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
SS18-222ENST00000582792 ST14Q9Y5Y6 855 aa13.54□□□□□ -0.24
SS18-222ENST00000582792 ZFC3H1O60293 1989 aaKnown RBP13.54□□□□□ -0.24
SS18-222ENST00000582792 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.53□□□□□ -0.24
SS18-222ENST00000582792 A0A1W2PQ67 120 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms