RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 PLEKHM1Q9Y4G2 1056 aa12.55□□□□□ -0.4
CSNK1D-218ENST00000581655 PIPSLA2A3N6 862 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 A8MX80 341 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 GOLGA8SH3BPF8 625 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 ADRA1BP35368 520 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 ADCY8P40145 1251 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 PGDP52209 483 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 APBA1Q02410 837 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 SEMA5AQ13591 1074 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 PEX6Q13608 980 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 ACOX1Q15067 660 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 C2CD6Q53TS8 623 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 TRIM65Q6PJ69 517 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 WDR74Q6RFH5 385 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 C6orf15Q6UXA7 325 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 XYLT1Q86Y38 959 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 SLC37A2Q8TED4 501 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 SHC3Q92529 594 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 NCSTNQ92542 709 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 C18orf8Q96DM3 657 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 MOCOSQ96EN8 888 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 KLHL3Q9UH77 587 aa12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSNK1D-218ENST00000581655 A6NCN8 305 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 CREG1O75629 220 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 ERCC5P28715 1186 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 GABRB2P47870 512 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 FASLGP48023 281 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 POLD2P49005 469 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 STIM1Q13586 685 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 CDO1Q16878 200 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 AFMIDQ63HM1 303 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 KLHL10Q6JEL2 608 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 DPPA4Q7L190 304 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 SLC47A2Q86VL8 602 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 PAF1Q8N7H5 531 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 GALNT6Q8NCL4 622 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 DHTKD1Q96HY7 919 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 FAM81BQ96LP2 452 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 SLC25A23Q9BV35 468 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 TEX101Q9BY14 249 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 SIDT1Q9NXL6 827 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 KCND3Q9UK17 655 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 TMEM59LQ9UK28 342 aa12.53□□□□□ -0.4
CSNK1D-218ENST00000581655 HIVEP1P15822 2718 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 RASA4BC9J798 803 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 RASA4O43374 803 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 MAP3K6O95382 1288 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 PLEKP08567 350 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 PNMA6AP0CW24 399 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 PRF1P14222 555 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 SLC9A1P19634 815 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 MAPK9P45984 424 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 MARSP56192 900 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 KRT85P78386 507 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 CDK3Q00526 305 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 FOXM1Q08050 763 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 CHAF1BQ13112 559 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 CPZQ66K79 652 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 ISM2Q6H9L7 571 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 DOK6Q6PKX4 331 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 EMC1Q8N766 993 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 NUS1Q96E22 293 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 STAMBPL1Q96FJ0 436 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 C5orf34Q96MH7 638 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 TUBGCP5Q96RT8 1024 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 APEX2Q9UBZ4 518 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 PDZD2O15018 2839 aa12.52□□□□□ -0.41
CSNK1D-218ENST00000581655 MTORP42345 2549 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 KIAA0754O94854 1291 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 SMC2O95347 1197 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 IVLP07476 585 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 SERPINA4P29622 427 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 CASP14P31944 242 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 CLCN1P35523 988 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 RGRP47804 291 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 YBEYP58557 167 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 HHEXQ03014 270 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 NFATC2Q13469 925 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 DNASE1L3Q13609 305 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 C15orf59Q2T9L4 293 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 LYSMD3Q7Z3D4 306 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 TP53INP2Q8IXH6 220 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 SLC34A3Q8N130 599 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 SFRP1Q8N474 314 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 RTL3Q8N8U3 475 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 Q8NA96 180 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 SMARCE1Q969G3 411 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 ECHDC3Q96DC8 303 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 OR2M4Q96R27 311 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 ATP13A3Q9H7F0 1226 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 MLXIPLQ9NP71 852 aa12.51□□□□□ -0.41
CSNK1D-218ENST00000581655 SLAMF7Q9NQ25 335 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms