RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	TMC8	Q8IU68	726 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	CPO	Q8IVL8	374 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	SLC15A3	Q8IY34	581 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	ADGRG5	Q8IZF4	528 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	TMEM132C	Q8N3T6	1108 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	SYT2	Q8N9I0	419 aa	Predicted RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	ATAD1	Q8NBU5	361 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	APPL2	Q8NEU8	664 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	OR10T2	Q8NGX3	314 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	OR6Y1	Q8NGX8	325 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	ZNF461	Q8TAF7	563 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM3C	Q92520	227 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	SMARCD2	Q92925	531 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	ELSPBP1	Q96BH3	223 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	GRAMD1A	Q96CP6	724 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	BOD1	Q96IK1	185 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	PKNOX2	Q96KN3	472 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	TRMT61B	Q9BVS5	477 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	EPS8L2	Q9H6S3	715 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	RPF1	Q9H9Y2	349 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	ZFP14	Q9HCL3	533 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	PRMT8	Q9NR22	394 aa	Predicted RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	TBC1D7	Q9P0N9	293 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	EIF2B4	Q9UI10	523 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	FBXO9	Q9UK97	447 aa	Predicted RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	UBQLN1	Q9UMX0	589 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	DAPP1	Q9UN19	280 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	TMEM98	Q9Y2Y6	226 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	KIF3A	Q9Y496	699 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	MYO16	Q9Y6X6	1858 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	KIAA1549L	Q6ZVL6	1849 aa		4.57	□□□□□ -1.68
MSI2-213	ENST00000581523	SCN1A	P35498	2009 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	HELZ	P42694	1942 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TTC26	A0AVF1	554 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM90A18P	A6NE21	464 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM90A16P	A6NEW6	464 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM90A9P	A6NNJ1	464 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM90A5P	A8MXJ8	464 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	AHRR	A9YTQ3	701 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523		F5H697	171 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523		H0Y3Z8	333 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523		J3KTA2	159 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	LAD1	O00515	517 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ZNF263	O14978	683 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	OGT	O15294	1046 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ZSCAN9	O15535	394 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PAX4	O43316	350 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	HCRT	O43612	131 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM189A1	O60320	539 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	RHOBTB3	O94955	611 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ZFPL1	O95159	310 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	C1R	P00736	705 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TK1	P04183	234 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	POLB	P06746	335 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM90A15P	P0C7V4	464 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM90A14P	P0C7W9	464 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	HGF	P14210	728 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PSMC3	P17980	439 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ATF6	P18850	670 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TNFAIP3	P21580	790 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	BDNF	P23560	247 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ACAT1	P24752	427 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	CFP	P27918	469 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	GABRR2	P28476	465 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	EPHA3	P29320	983 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	CD6	P30203	668 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	RPL9	P32969	192 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	UBA7	P41226	1012 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	AARS	P49588	968 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PDE6C	P51160	858 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PGD	P52209	483 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PRKAA2	P54646	552 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	GEMIN4	P57678	1058 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	MPP1	Q00013	466 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	CEBPZ	Q03701	1054 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TUBB3	Q13509	450 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PON2	Q15165	354 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ZNF124	Q15973	351 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	CYP2A13	Q16696	494 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	RILPL1	Q5EBL4	403 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	RBM20	Q5T481	1227 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TPGS2	Q68CL5	300 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	SP5	Q6BEB4	398 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM173B	Q6P4H8	233 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	RAB11FIP2	Q7L804	512 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	HAUS6	Q7Z4H7	955 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	C1QL4	Q86Z23	238 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	EFCAB13	Q8IY85	973 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	SUMF1	Q8NBK3	374 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	BEST2	Q8NFU1	509 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	CSGALNACT1	Q8TDX6	532 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	WDR60	Q8WVS4	1066 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ATRIP	Q8WXE1	791 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	SNX19	Q92543	992 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	RAD54L	Q92698	747 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms