RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 SERAC1Q96JX3 654 aa13.55□□□□□ -0.24
NDE1-209ENST00000574109 SERPINB12Q96P63 405 aa13.55□□□□□ -0.24
NDE1-209ENST00000574109 APOL2Q9BQE5 337 aa13.55□□□□□ -0.24
NDE1-209ENST00000574109 NAT9Q9BTE0 207 aa13.55□□□□□ -0.24
NDE1-209ENST00000574109 ZSCAN5AQ9BUG6 496 aa13.55□□□□□ -0.24
NDE1-209ENST00000574109 FOXP3Q9BZS1 431 aa13.55□□□□□ -0.24
NDE1-209ENST00000574109 MRM3Q9HC36 420 aaKnown RBP13.55□□□□□ -0.24
NDE1-209ENST00000574109 SAMD15Q9P1V8 674 aa13.55□□□□□ -0.24
NDE1-209ENST00000574109 A0A1B0GTW7 788 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 PROB1E7EW31 1015 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 STX7O15400 261 aaKnown RBP13.54□□□□□ -0.24
NDE1-209ENST00000574109 FOXD2O60548 495 aaPredicted RBP13.54□□□□□ -0.24
NDE1-209ENST00000574109 CLDN7O95471 211 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 C1SP09871 688 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 PIRTP0C851 137 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 ADRA1DP25100 572 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 IVDP26440 423 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 MAT2AP31153 395 aaKnown RBP13.54□□□□□ -0.24
NDE1-209ENST00000574109 SPAM1P38567 509 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 PTGER3P43115 390 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 MAGEA3P43357 314 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 RPL21P46778 160 aaKnown RBP13.54□□□□□ -0.24
NDE1-209ENST00000574109 ZNF140P52738 457 aaPredicted RBP13.54□□□□□ -0.24
NDE1-209ENST00000574109 PTSQ03393 145 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 SEPT6Q14141 434 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 HIF1AQ16665 826 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 CDKN3Q16667 212 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 HIBCHQ6NVY1 386 aaPredicted RBP13.54□□□□□ -0.24
NDE1-209ENST00000574109 ZNF534Q76KX8 674 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 DCP2Q8IU60 420 aaKnown RBP13.54□□□□□ -0.24
NDE1-209ENST00000574109 PDIK1LQ8N165 341 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 CBARPQ8N350 705 aaPredicted RBP13.54□□□□□ -0.24
NDE1-209ENST00000574109 STYXQ8WUJ0 223 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 SEC14L1Q92503 715 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 FAM114A2Q9NRY5 505 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 APPL1Q9UKG1 709 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 PILRBQ9UKJ0 227 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 TCAF1Q9Y4C2 921 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 SPO11Q9Y5K1 396 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 HS3ST3A1Q9Y663 406 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 BPTFQ12830 3046 aa13.54□□□□□ -0.24
NDE1-209ENST00000574109 PCDH15Q96QU1 1955 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 H7C0S8 307 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 BCAT2O15382 392 aaPredicted RBP13.53□□□□□ -0.24
NDE1-209ENST00000574109 SLC31A1O15431 190 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 LMNAP02545 664 aaKnown RBP13.53□□□□□ -0.24
NDE1-209ENST00000574109 SLC4A1P02730 911 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 RETP07949 1114 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 PAMP19021 973 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 ETV3P41162 512 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 RABIFP47224 123 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 ITGA8P53708 1063 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 ARL4CP56559 192 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 YPEL5P62699 121 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 OLIG2Q13516 323 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 ITGA9Q13797 1035 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 STAT4Q14765 748 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 POU6F1Q14863 301 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 IRF4Q15306 451 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 DUOXA1Q1HG43 343 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 SKIDA1Q1XH10 827 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 PCID2Q5JVF3 399 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 FAM182AQ5T1J6 154 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 HENMT1Q5T8I9 393 aaKnown RBP13.53□□□□□ -0.24
NDE1-209ENST00000574109 ANKRD22Q5VYY1 191 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 DENND2CQ68D51 928 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 ARMCX6Q7L4S7 300 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 HSD11B1LQ7Z5J1 315 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 TECPR1Q7Z6L1 1165 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 ABI3BPQ7Z7G0 1075 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 TP53I13Q8NBR0 393 aaPredicted RBP13.53□□□□□ -0.24
NDE1-209ENST00000574109 NOA1Q8NC60 698 aaKnown RBP13.53□□□□□ -0.24
NDE1-209ENST00000574109 AP2M1Q96CW1 435 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 TSPYL1Q9H0U9 437 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 AASDHPPTQ9NRN7 309 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 IL17CQ9P0M4 197 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 EIF2B4Q9UI10 523 aaKnown RBP13.53□□□□□ -0.24
NDE1-209ENST00000574109 ANAPC5Q9UJX4 755 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 TMEM131Q92545 1883 aa13.53□□□□□ -0.24
NDE1-209ENST00000574109 ZFC3H1O60293 1989 aaKnown RBP13.52□□□□□ -0.24
NDE1-209ENST00000574109 MAGEB16A2A368 324 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 MROH6A6NGR9 719 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 SDR42E2A6NKP2 422 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 A8MX80 341 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 EIF3HO15372 352 aaKnown RBP eCLIP13.52□□□□□ -0.25
NDE1-209ENST00000574109 LDB2O43679 373 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 SLU7O95391 586 aaKnown RBP13.52□□□□□ -0.25
NDE1-209ENST00000574109 PAK4O96013 591 aaPredicted RBP13.52□□□□□ -0.25
NDE1-209ENST00000574109 KELP23276 732 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 ITPKAP23677 461 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 PSMA3P25788 255 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 CD38P28907 300 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 IGFALSP35858 605 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 MPLP40238 635 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 SESN2P58004 480 aaPredicted RBP13.52□□□□□ -0.25
NDE1-209ENST00000574109 CBLBQ13191 982 aa13.52□□□□□ -0.25
NDE1-209ENST00000574109 MSLNQ13421 630 aaPredicted RBP13.52□□□□□ -0.25
NDE1-209ENST00000574109 CUL1Q13616 776 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms