RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 BLKP51451 505 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 ETF1P62495 437 aaKnown RBP12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 PDE1BQ01064 536 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 BNC1Q01954 994 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 DPTQ07507 201 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 INPP5AQ14642 412 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 INAVAQ3KP66 663 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 ZDHHC20Q5W0Z9 365 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 RAET1GQ6H3X3 334 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 PNCKQ6P2M8 343 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 RANBP10Q6VN20 620 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 Q6ZVL8 140 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 LYSMD3Q7Z3D4 306 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 TECPR1Q7Z6L1 1165 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 PARGQ86W56 976 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 ASCC3Q8N3C0 2202 aaKnown RBP12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 PRELID2Q8N945 189 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 BLOC1S5Q8TDH9 187 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 AP2M1Q96CW1 435 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 RTKNQ9BST9 563 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 APOOQ9BUR5 198 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 AP1M1Q9BXS5 423 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 WDR26Q9H7D7 661 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 TM7SF3Q9NS93 570 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 SHOC2Q9UQ13 582 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 PCDHGB2Q9Y5G2 931 aa12.75□□□□□ -0.37
TRAPPC1-206ENST00000573989 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 GOLGA8CPA6NN73 597 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 C2orf81A6NN90 581 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 SLC30A4O14863 429 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 ZNF185O15231 689 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 PHF2O75151 1096 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 PPFIA2O75334 1257 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 METTL18O95568 372 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 CRTAMO95727 393 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 AP2A1O95782 977 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 TUBB4AP04350 444 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 HOXC4P09017 264 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 C1SP09871 688 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 PIRTP0C851 137 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 TEAD1P28347 426 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 ADRA1AP35348 466 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 HMGCLP35914 325 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 COILP38432 576 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 GPR1P46091 355 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 KCNJ1P48048 391 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 SPINT3P49223 89 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 FNTAP49354 379 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 CYP1B1Q16678 543 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 RSPO4Q2I0M5 234 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 MACC1Q6ZN28 852 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 GLT6D1Q7Z4J2 308 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 SPATS2Q86XZ4 545 aaKnown RBP12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 KLHDC8BQ8IXV7 354 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 BTN2A2Q8WVV5 523 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 CAPZA3Q96KX2 299 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 RUNDC3BQ96NL0 473 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 GORASP1Q9BQQ3 440 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 FAM83DQ9H4H8 585 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 ARNT2Q9HBZ2 717 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 RAB6BQ9NRW1 208 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 PHPT1Q9NRX4 125 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 GPR27Q9NS67 375 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 PKP3Q9Y446 797 aa12.74□□□□□ -0.37
TRAPPC1-206ENST00000573989 AP3B1O00203 1094 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 PCDHGA12O60330 932 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 SLC4A1P02730 911 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 GM2AP17900 193 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 TRIM23P36406 574 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 CHRNA4P43681 627 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 RXRGP48443 463 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 KIAA1024LP59773 190 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 DCDC1P59894 354 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 HNRNPKP61978 463 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 BASP1P80723 227 aaKnown RBP12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 SEMA5AQ13591 1074 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 NFATC4Q14934 902 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 PTPRRQ15256 657 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 CDKN3Q16667 212 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 FAXCQ5TGI0 409 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 KCTD11Q693B1 232 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 PPP1R21Q6ZMI0 780 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 TMC3Q7Z5M5 1100 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 SLC22A18ASQ8N1D0 253 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 C17orf53Q8N3J3 647 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 DNAAF3Q8N9W5 541 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 BRSK1Q8TDC3 778 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 WDR92Q96MX6 357 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 SMIM14Q96QK8 99 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 ZSCAN5AQ9BUG6 496 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 SLC13A1Q9BZW2 595 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 ABCG8Q9H221 673 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 SLC32A1Q9H598 525 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 ETNK1Q9HBU6 452 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 DNAJC28Q9NX36 388 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 CD84Q9UIB8 345 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms