RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 EID2BQ96D98 161 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 SCARF2Q96GP6 870 aaPredicted RBP17.29■□□□□ 0.36
SMG6-212ENST00000573153 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 AGAP2Q99490 1192 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 CCDC3Q9BQI4 270 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 ANP32EQ9BTT0 268 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 ABCG8Q9H221 673 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 GOLPH3Q9H4A6 298 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 ASCL3Q9NQ33 180 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 NCKIPSDQ9NZQ3 722 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 PADI4Q9UM07 663 aa17.29■□□□□ 0.36
SMG6-212ENST00000573153 PCYT1BQ9Y5K3 369 aaPredicted RBP17.29■□□□□ 0.36
SMG6-212ENST00000573153 SMG1Q96Q15 3661 aaKnown RBP17.29■□□□□ 0.36
SMG6-212ENST00000573153 PRSS38A1L453 326 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 KCNK1O00180 336 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 CACNB4O00305 520 aaPredicted RBP17.28■□□□□ 0.36
SMG6-212ENST00000573153 PSTPIP1O43586 416 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 CYP2A6P11509 494 aaPredicted RBP17.28■□□□□ 0.36
SMG6-212ENST00000573153 ZFXP17010 805 aaPredicted RBP17.28■□□□□ 0.36
SMG6-212ENST00000573153 COMTP21964 271 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 ITPKBP27987 946 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 STC1P52823 247 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 TBC1D25Q3MII6 688 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 MFSD7Q6UXD7 560 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 CCDC13Q8IYE1 715 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 ATL2Q8NHH9 583 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 HNRNPLLQ8WVV9 542 aaKnown RBP17.28■□□□□ 0.36
SMG6-212ENST00000573153 HIC2Q96JB3 615 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 ZNF830Q96NB3 372 aaPredicted RBP17.28■□□□□ 0.36
SMG6-212ENST00000573153 DEPDC7Q96QD5 511 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 CHKBQ9Y259 395 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 SLC17A4Q9Y2C5 497 aa17.28■□□□□ 0.36
SMG6-212ENST00000573153 TNFP01375 233 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 MPOP05164 745 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 CYLC1P35663 651 aaPredicted RBP17.27■□□□□ 0.36
SMG6-212ENST00000573153 NOP2P46087 812 aaKnown RBP17.27■□□□□ 0.36
SMG6-212ENST00000573153 MARCKSL1P49006 195 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 RPL26P61254 145 aaKnown RBP17.27■□□□□ 0.36
SMG6-212ENST00000573153 QPCTQ16769 361 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 ZFYVE27Q5T4F4 411 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 C11orf63Q6NUN7 778 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 IGF2-ASQ6U949 168 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 USP45Q70EL2 814 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 NLRP8Q86W28 1048 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 GAS2L3Q86XJ1 694 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 RAVER1Q8IY67 606 aaKnown RBP17.27■□□□□ 0.36
SMG6-212ENST00000573153 PAF1Q8N7H5 531 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 GPBAR1Q8TDU6 330 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 NAT6Q93015 286 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 SCAMP4Q969E2 229 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 CCDC74AQ96AQ1 378 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 CALR3Q96L12 384 aaKnown RBP17.27■□□□□ 0.36
SMG6-212ENST00000573153 BRD8Q9H0E9 1235 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 LUC7LQ9NQ29 371 aaKnown RBP17.27■□□□□ 0.36
SMG6-212ENST00000573153 EVA1BQ9NVM1 165 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 SIRPGQ9P1W8 387 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 RPL26L1Q9UNX3 145 aaKnown RBP17.27■□□□□ 0.36
SMG6-212ENST00000573153 GPR34Q9UPC5 381 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 PCDHA13Q9Y5I0 950 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 ALG6Q9Y672 507 aa17.27■□□□□ 0.36
SMG6-212ENST00000573153 KIF26BQ2KJY2 2108 aa17.27■□□□□ 0.35
SMG6-212ENST00000573153 CACNA1GO43497 2377 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 ARHGEF17Q96PE2 2063 aaPredicted RBP17.26■□□□□ 0.35
SMG6-212ENST00000573153 RCCD1A6NED2 376 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 APOL1O14791 398 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 USP12O75317 370 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 TCEA3O75764 348 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 JCHAINP01591 159 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 KRT1P04264 644 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 KRT10P13645 584 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 CDKN2BP42772 138 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 POLD2P49005 469 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 HLTFQ14527 1009 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMG6-212ENST00000573153 SPA17Q15506 151 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 DENND2CQ68D51 928 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 B4GALNT4Q76KP1 1039 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 ZNF765Q7L2R6 523 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 B3GNT8Q7Z7M8 397 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 PDZD3Q86UT5 571 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 GKN2Q86XP6 184 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 TMTC1Q8IUR5 882 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMG6-212ENST00000573153 RNF25Q96BH1 459 aaPredicted RBP17.26■□□□□ 0.35
SMG6-212ENST00000573153 ATXN7L3BQ96GX2 97 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 COX14Q96I36 57 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 MAK16Q9BXY0 300 aaKnown RBP17.26■□□□□ 0.35
SMG6-212ENST00000573153 CEP41Q9BYV8 373 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 CYP4F12Q9HCS2 524 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 SPATS2LQ9NUQ6 558 aaKnown RBP17.26■□□□□ 0.35
SMG6-212ENST00000573153 CD84Q9UIB8 345 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 CNOT6Q9ULM6 557 aaKnown RBP17.26■□□□□ 0.35
SMG6-212ENST00000573153 AK5Q9Y6K8 562 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 PTPRQQ9UMZ3 2332 aa17.26■□□□□ 0.35
SMG6-212ENST00000573153 IGSF10Q6WRI0 2623 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 BTNL10A8MVZ5 291 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 SPOPO43791 374 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 CLDN7O95471 211 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 CTSEP14091 401 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 PECAM1P16284 738 aaPredicted RBP17.25■□□□□ 0.35
SMG6-212ENST00000573153 ZNF30P17039 623 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms