RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ADAMTS20P59510 1910 aa11.9□□□□□ -0.51
NDE1-206ENST00000572967 AKAP13Q12802 2813 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 SHROOM3Q8TF72 1996 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 C16orf96A6NNT2 1141 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 NEMP1O14524 444 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 RAD51BO15315 384 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 INSIG1O15503 277 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 TTI1O43156 1089 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 SPINT1O43278 529 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 RAD51CO43502 376 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 SOCS5O75159 536 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 PIGNO95427 931 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 POP4O95707 220 aaKnown RBP11.89□□□□□ -0.51
NDE1-206ENST00000572967 HLA-DQB2P05538 268 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 NFKB1P19838 968 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 SERPINA4P29622 427 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 RXRGP48443 463 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 GDF10P55107 478 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 RPS21P63220 83 aaKnown RBP11.89□□□□□ -0.51
NDE1-206ENST00000572967 BASP1P80723 227 aaKnown RBP11.89□□□□□ -0.51
NDE1-206ENST00000572967 CAV1Q03135 178 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 MPP3Q13368 585 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 ZNF542PQ5EBM4 170 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 HES3Q5TGS1 186 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 KYAT3Q6YP21 454 aaKnown RBP11.89□□□□□ -0.51
NDE1-206ENST00000572967 LINC00523Q86TU6 105 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 HOOK3Q86VS8 718 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 NDUFAF2Q8N183 169 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 SNF8Q96H20 258 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 KLHL32Q96NJ5 620 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 SEMA3CQ99985 751 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 ERP44Q9BS26 406 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 LRRC40Q9H9A6 602 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
NDE1-206ENST00000572967 RAB6BQ9NRW1 208 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 FAM114A2Q9NRY5 505 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 DNAJC28Q9NX36 388 aa11.89□□□□□ -0.51
NDE1-206ENST00000572967 POM121BA6NF01 834 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 IGLON5A6NGN9 336 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 TRIM38O00635 465 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 SIGLEC6O43699 453 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 AP1G1O43747 822 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 PIAS2O75928 621 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
NDE1-206ENST00000572967 PSMB4P28070 264 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 RPL22P35268 128 aaKnown RBP11.88□□□□□ -0.51
NDE1-206ENST00000572967 HNF1BP35680 557 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 PTGIRP43119 386 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 VPS41P49754 854 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 SCNN1BP51168 640 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 BCL2L1Q07817 233 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 SEMA5AQ13591 1074 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 CUL1Q13616 776 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 CYTH1Q15438 398 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 SMAD1Q15797 465 aaKnown RBP11.88□□□□□ -0.51
NDE1-206ENST00000572967 ZNF805Q5CZA5 627 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 Q6ZSR6 202 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 ABI3BPQ7Z7G0 1075 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 SRLQ86TD4 932 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 PPIL6Q8IXY8 311 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 IFT20Q8IY31 132 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 TSEN2Q8NCE0 465 aaKnown RBP11.88□□□□□ -0.51
NDE1-206ENST00000572967 IFT43Q96FT9 208 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 IMP4Q96G21 291 aaKnown RBP11.88□□□□□ -0.51
NDE1-206ENST00000572967 ADGRE3Q9BY15 652 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 CEP41Q9BYV8 373 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 TSPYL1Q9H0U9 437 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 C10orf88Q9H8K7 445 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 WHRNQ9P202 907 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 LHX3Q9UBR4 397 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 SHOC2Q9UQ13 582 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 RAXQ9Y2V3 346 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 PCDHGA1Q9Y5H4 931 aa11.88□□□□□ -0.51
NDE1-206ENST00000572967 COL27A1Q8IZC6 1860 aaPredicted RBP11.88□□□□□ -0.51
NDE1-206ENST00000572967 RIOK3O14730 519 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 PAK4O96013 591 aaPredicted RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 CAPNS1P04632 268 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 APRTP07741 180 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 ITIH2P19823 946 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 TPSB2P20231 275 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 DGKAP23743 735 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 IGFALSP35858 605 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 DRG2P55039 364 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 RPL26P61254 145 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 DAB2P98082 770 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 PDE1CQ14123 709 aaPredicted RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 MORF4L2Q15014 288 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 TPSAB1Q15661 275 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 MYLK3Q32MK0 819 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 TPRG1LQ5T0D9 272 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 GDPD4Q6W3E5 623 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 B4GALNT4Q76KP1 1039 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 CNTD1Q8N815 330 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 NOA1Q8NC60 698 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 LRRN4Q8WUT4 740 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.87□□□□□ -0.51
NDE1-206ENST00000572967 VOPP1Q96AW1 172 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 FEM1CQ96JP0 617 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 ZNF641Q96N77 438 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms