RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 NFKB1P19838 968 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 HTR1BP28222 390 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 RBL1P28749 1068 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 PTPN7P35236 360 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 HNF1BP35680 557 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 IGFALSP35858 605 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 GRK6P43250 576 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 YPEL5P62699 121 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 SKOR1P84550 965 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 RALGDSQ12967 914 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 BNIP3Q12983 259 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 GALNT3Q14435 633 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 PRPSAP1Q14558 356 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 CNGA3Q16281 694 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 ZNF542PQ5EBM4 170 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 FAM182AQ5T1J6 154 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 ITPRIPL1Q6GPH6 555 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 PCSK4Q6UW60 755 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 CCNI2Q6ZMN8 369 aaPredicted RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 SPATS2Q86XZ4 545 aaKnown RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 CNTD1Q8N815 330 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 TP53I13Q8NBR0 393 aaPredicted RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 ATL2Q8NHH9 583 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 SPATA22Q8NHS9 363 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 CCHCR1Q8TD31 782 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 UBE2Q2Q8WVN8 375 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 PIH1D2Q8WWB5 315 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 CENPTQ96BT3 561 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 SCRN2Q96FV2 425 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 IMP4Q96G21 291 aaKnown RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 HES6Q96HZ4 224 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 BMFQ96LC9 184 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 TEKT5Q96M29 485 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 CAMK1GQ96NX5 476 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 KLF6Q99612 283 aaPredicted RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 MLPHQ9BV36 600 aaPredicted RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 FSD1LQ9BXM9 530 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 SLC25A51Q9H1U9 297 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 C10orf88Q9H8K7 445 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 MBNL1Q9NR56 388 aaKnown RBP7.79□□□□□ -1.16
SMG6-211ENST00000572369 KCTD5Q9NXV2 234 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 UBP1Q9NZI7 540 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 FAM153AQ9UHL3 310 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 MOSPD1Q9UJG1 213 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 DNPEPQ9ULA0 475 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 PCDHGB2Q9Y5G2 931 aa7.79□□□□□ -1.16
SMG6-211ENST00000572369 URB1O60287 2271 aaKnown RBP7.78□□□□□ -1.16
SMG6-211ENST00000572369 NF1P21359 2839 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 C1orf232A0A0U1RR37 186 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 SPTY2D1-AS1A0A0U1RR47 76 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 NEMP2A6NFY4 417 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 PSMD11O00231 422 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 CACNB4O00305 520 aaPredicted RBP7.78□□□□□ -1.16
SMG6-211ENST00000572369 TOR1BO14657 336 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 SLC28A2O43868 658 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 PCDHGA12O60330 932 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 ZNF189O75820 626 aaPredicted RBP7.78□□□□□ -1.16
SMG6-211ENST00000572369 CLDN7O95471 211 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 MT-CYBP00156 380 aaPredicted RBP7.78□□□□□ -1.16
SMG6-211ENST00000572369 SLC4A1P02730 911 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 MMP2P08253 660 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 ALPPL2P10696 532 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 CTSEP14091 401 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 ZNF30P17039 623 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 KELP23276 732 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 MSNP26038 577 aaKnown RBP7.78□□□□□ -1.16
SMG6-211ENST00000572369 EPHA8P29322 1005 aaPredicted RBP7.78□□□□□ -1.16
SMG6-211ENST00000572369 ETV3P41162 512 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 GEMP55040 296 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 PFN3P60673 137 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 RPL26P61254 145 aaKnown RBP7.78□□□□□ -1.16
SMG6-211ENST00000572369 HNRNPKP61978 463 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG6-211ENST00000572369 CDK18Q07002 472 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 WASHC5Q12768 1159 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 MTM1Q13496 603 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 INPP5AQ14642 412 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 GSE1Q14687 1217 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 AGERQ15109 404 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 PTPRRQ15256 657 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 TRIP6Q15654 476 aaKnown RBP7.78□□□□□ -1.16
SMG6-211ENST00000572369 WSCD2Q2TBF2 565 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 KRTAP21-3Q3LHN1 58 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 C4orf17Q53FE4 359 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 CCDC157Q569K6 752 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 FAXCQ5TGI0 409 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 MEI1Q5TIA1 1274 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 LRRC66Q68CR7 880 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 RAET1GQ6H3X3 334 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 CRTC1Q6UUV9 634 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 ENPP7Q6UWV6 458 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 KDM7AQ6ZMT4 941 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 ZNF662Q6ZS27 426 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 ARHGEF18Q6ZSZ5 1173 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 RD3Q7Z3Z2 195 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 TSPAN33Q86UF1 283 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 PARGQ86W56 976 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 ZNF567Q8N184 647 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 SLC22A18ASQ8N1D0 253 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 EID2Q8N6I1 236 aa7.78□□□□□ -1.16
SMG6-211ENST00000572369 BTN2A2Q8WVV5 523 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms