RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ARSBP15848 533 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 TKTP29401 623 aaKnown RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 CDC25AP30304 524 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 AVPR2P30518 371 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 SLC1A4P43007 532 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 HAND2P61296 217 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 IKQ13123 557 aaPredicted RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 ERV3-1Q14264 604 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 POSTNQ15063 836 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 DUSP6Q16828 381 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 TIGD6Q17RP2 521 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 SHROOM1Q2M3G4 852 aaPredicted RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 FAM83BQ5T0W9 1011 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 WDR78Q5VTH9 848 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 RNF144BQ7Z419 303 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 ZNF589Q86UQ0 364 aaPredicted RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 FAM160B2Q86V87 743 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 CAMK1DQ8IU85 385 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 FAM217AQ8IXS0 508 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 C7orf57Q8NEG2 295 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 CMASQ8NFW8 434 aaPredicted RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 SLF1Q9BQI6 1058 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 HERC2P3Q9BVR0 1158 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 CADM1Q9BY67 442 aaKnown RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 CLPBQ9H078 707 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.28□□□□□ -1.72
NUP88-202ENST00000570937 PLAC1Q9HBJ0 212 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 KRCC1Q9NPI7 259 aaPredicted RBP4.28□□□□□ -1.72
NUP88-202ENST00000570937 TCP11L1Q9NUJ3 509 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 THAP1Q9NVV9 213 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 PLK2Q9NYY3 685 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 KIF17Q9P2E2 1029 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 FEM1BQ9UK73 627 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 PCDHA7Q9UN72 937 aa4.28□□□□□ -1.72
NUP88-202ENST00000570937 PLIN4Q96Q06 1357 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 LAMB1P07942 1786 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 MYH7P12883 1935 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 NAV1Q8NEY1 1877 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 IGKV6D-41A0A0C4DH26 115 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 SLC15A5A6NIM6 579 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 VWA5AO00534 786 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 REC8O95072 547 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 METTL18O95568 372 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 NDUFB10O96000 172 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 LDHAP00338 332 aaKnown RBP4.27□□□□□ -1.73
NUP88-202ENST00000570937 TK1P04183 234 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 CSF1P09603 554 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 MYZAPP0CAP1 466 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 UNGP13051 313 aaPredicted RBP4.27□□□□□ -1.73
NUP88-202ENST00000570937 HOXB6P17509 224 aaKnown RBP4.27□□□□□ -1.73
NUP88-202ENST00000570937 CHRNB2P17787 502 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 MCCP23508 829 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 RGS2P41220 211 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
NUP88-202ENST00000570937 GRK6P43250 576 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 STAT2P52630 851 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 MVDP53602 400 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 SELENOVP59797 346 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 ROR2Q01974 943 aaKnown RBP4.27□□□□□ -1.73
NUP88-202ENST00000570937 PRKCZQ05513 592 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 CUL4BQ13620 913 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 KCTD2Q14681 263 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 MFSD14CQ5VZR4 134 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 PDXDC1Q6P996 788 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 MEPCEQ7L2J0 689 aaKnown RBP4.27□□□□□ -1.73
NUP88-202ENST00000570937 ZDHHC23Q8IYP9 409 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 TMTC2Q8N394 836 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 MYCT1Q8N699 235 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 NCOA7Q8NI08 942 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 SPPL3Q8TCT6 385 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 CSGALNACT1Q8TDX6 532 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 FAR1Q8WVX9 515 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 GOLGA1Q92805 767 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 ZNF333Q96JL9 665 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 SF3B5Q9BWJ5 86 aaKnown RBP4.27□□□□□ -1.73
NUP88-202ENST00000570937 TEX13BQ9BXU2 312 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 SPATC1LQ9H0A9 340 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 KLHL31Q9H511 634 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 KAT14Q9H8E8 782 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 UPB1Q9UBR1 384 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 FBXO40Q9UH90 709 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.27□□□□□ -1.73
NUP88-202ENST00000570937 CASP8AP2Q9UKL3 1982 aa4.27□□□□□ -1.73
NUP88-202ENST00000570937 CDK5RAP2Q96SN8 1893 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 TRIP12Q14669 1992 aaPredicted RBP4.26□□□□□ -1.73
NUP88-202ENST00000570937 C17orf100A8MU93 164 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 ATP2A1O14983 1001 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 NMT2O60551 498 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 KRT38O76015 456 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 TMCC1O94876 653 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 DDAH2O95865 285 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 LCATP04180 440 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 HOXC6P09630 235 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 CYP2B6P20813 491 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 CCKBRP32239 447 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 TRAPPC10P48553 1259 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 NOVP48745 357 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 AARSP49588 968 aaKnown RBP eCLIP4.26□□□□□ -1.73
NUP88-202ENST00000570937 RGS19P49795 217 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 ZP1P60852 638 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms