RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 RBM22Q9NW64 420 aaKnown RBP eCLIP17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TRNAU1APQ9NX07 287 aaKnown RBP17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SLC17A4Q9Y2C5 497 aa17.07■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CAPN8A6NHC0 703 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 A8MX80 341 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 NOBOXO60393 691 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PRLP01236 227 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CEACAM5P06731 702 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GLB1P16278 677 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GJC1P36383 396 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SLC1A1P43005 524 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 HADHBP55084 474 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PCBP4P57723 403 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 IFI35P80217 286 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SKOR1P84550 965 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PTSQ03393 145 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SPIDRQ14159 915 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CRTC1Q6UUV9 634 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ADAMTSL4Q6UY14 1074 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 Q6ZVL8 140 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 RD3Q7Z3Z2 195 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TSPAN33Q86UF1 283 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCDC13Q8IYE1 715 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 NRSN1Q8IZ57 195 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ZNF248Q8NDW4 579 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 RAPGEF5Q92565 580 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCDC74AQ96AQ1 378 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PRR11Q96HE9 360 aaPredicted RBP17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PRORYQ9H606 182 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 MRPL40Q9NQ50 206 aaKnown RBP17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SSUH2Q9Y2M2 353 aa17.06■□□□□ 0.32
MAP1LC3B-208ENST00000570189 A0A1W2PNU3 283 aaPredicted RBP17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 D6RAR5 112 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TMX2-CTNND1H3BSU7 103 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 NUDT21O43809 227 aaKnown RBP17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SOD1P00441 154 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 MPOP05164 745 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 HLA-DQB2P05538 268 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 IVLP07476 585 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 STC1P52823 247 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 DSC2Q02487 901 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 EIF3IQ13347 325 aaKnown RBP17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PEX6Q13608 980 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 HLTFQ14527 1009 aaKnown RBP eCLIP17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 MESDQ14696 234 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 NR1D2Q14995 579 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SLC14A2Q15849 920 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 LRRC66Q68CR7 880 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TAF8Q7Z7C8 310 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CLEC14AQ86T13 490 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 WDR36Q8NI36 951 aaKnown RBP17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ATXN7L3BQ96GX2 97 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ZNF830Q96NB3 372 aaPredicted RBP17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SLC46A1Q96NT5 459 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 OLFM3Q96PB7 478 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 DCBLD2Q96PD2 775 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 BRD8Q9H0E9 1235 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TMEM168Q9H0V1 697 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CYP4F12Q9HCS2 524 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 THSD1Q9NS62 852 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GULP1Q9UBP9 304 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 RABGEF1Q9UJ41 708 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SATB2Q9UPW6 733 aa17.05■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCDC187A0A096LP49 1063 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 A0A1W2PQM1 296 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CDRT15L2A8MXV6 281 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 FUCA1P04066 466 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ZFXP17010 805 aaPredicted RBP17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCKBRP32239 447 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ITKQ08881 620 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 NIPAL4Q0D2K0 466 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 C14orf28Q4W4Y0 310 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ZNF438Q7Z4V0 828 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 NRROSQ86YC3 692 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 FAM46DQ8NEK8 389 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 KIAA1524Q8TCG1 905 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GSDMCQ9BYG8 508 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 DPH1Q9BZG8 443 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ABCG8Q9H221 673 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 DDX56Q9NY93 547 aaKnown RBP17.04■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SMG1Q96Q15 3661 aaKnown RBP17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 LRRD1A4D1F6 860 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 RGSL1A5PLK6 1076 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 AKR1B15C9JRZ8 316 aaPredicted RBP17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 MAP3K6O95382 1288 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 LCA5LO95447 670 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 MMP2P08253 660 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CTPS1P17812 591 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ITPKBP27987 946 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TLE3Q04726 772 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ILF3Q12906 894 aaKnown RBP eCLIP17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TAZQ16635 292 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CLPPQ16740 277 aaPredicted RBP17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 RAET1GQ6H3X3 334 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SPACA3Q8IXA5 215 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 RHOT1Q8IXI2 618 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 AP2M1Q96CW1 435 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 COX14Q96I36 57 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 GFM1Q96RP9 751 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms