RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 GGT7Q9UJ14 662 aa14.63□□□□□ -0.07
COMMD4-221ENST00000567935 GMEB2Q9UKD1 530 aa14.63□□□□□ -0.07
COMMD4-221ENST00000567935 SLC39A10Q9ULF5 831 aa14.63□□□□□ -0.07
COMMD4-221ENST00000567935 CHKBQ9Y259 395 aa14.63□□□□□ -0.07
COMMD4-221ENST00000567935 HS3ST2Q9Y278 367 aa14.63□□□□□ -0.07
COMMD4-221ENST00000567935 MRPS23Q9Y3D9 190 aaKnown RBP14.63□□□□□ -0.07
COMMD4-221ENST00000567935 NUP210Q8TEM1 1887 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-221ENST00000567935 ANKRD36A6QL64 1941 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 FAM95CA0A1B0GW59 222 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 A0A1W2PQ67 120 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 TTC24A2A3L6 582 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-221ENST00000567935 CCDC78A2IDD5 438 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 WDR91A4D1P6 747 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 FZD6O60353 706 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 LPOP22079 712 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-221ENST00000567935 GRK2P25098 689 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 GABRB3P28472 473 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 SLC26A3P40879 764 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 ZNF140P52738 457 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-221ENST00000567935 SHC2P98077 582 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 IFT88Q13099 833 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 SLC5A9Q2M3M2 681 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 PITRM1Q5JRX3 1037 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 ARMC12Q5T9G4 340 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 TPGS1Q6ZTW0 290 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 FAM47EQ6ZV65 393 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 RAPH1Q70E73 1250 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 OTOAQ7RTW8 1153 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 APCDD1Q8J025 514 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 OTUD6BQ8N6M0 293 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 CELF5Q8N6W0 485 aaKnown RBP14.62□□□□□ -0.07
COMMD4-221ENST00000567935 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.62□□□□□ -0.07
COMMD4-221ENST00000567935 CCDC63Q8NA47 563 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 LPCAT1Q8NF37 534 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 SMG7Q92540 1137 aaKnown RBP14.62□□□□□ -0.07
COMMD4-221ENST00000567935 DOCK6Q96HP0 2047 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 EXOC2Q96KP1 924 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 TUBGCP5Q96RT8 1024 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 TRIM55Q9BYV6 548 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 ATP13A3Q9H7F0 1226 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 SPHK2Q9NRA0 654 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 INTS10Q9NVR2 710 aaKnown RBP14.62□□□□□ -0.07
COMMD4-221ENST00000567935 ZSCAN32Q9NX65 697 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 SLC25A13Q9UJS0 675 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 ZMIZ1Q9ULJ6 1067 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 ACOT9Q9Y305 439 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 ACTL7AQ9Y615 435 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 USH1CQ9Y6N9 552 aa14.62□□□□□ -0.07
COMMD4-221ENST00000567935 CCT8L1PA6NM43 557 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 GOLGA8TH3BQL2 631 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 NRG2O14511 850 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 SCAMP3O14828 347 aaKnown RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 CD3EAPO15446 510 aaKnown RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 PGLSO95336 258 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 GSRP00390 522 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 BGNP21810 368 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 VASPP50552 380 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 EPHB1P54762 984 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 SNRPD1P62314 119 aaKnown RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 TMPRSS15P98073 1019 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 MPP1Q00013 466 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 BCL2L1Q07817 233 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 CCDC15Q0P6D6 951 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 ASPHQ12797 758 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 TRAF2Q12933 501 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 CTBP1Q13363 440 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 TYSND1Q2T9J0 566 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 FASTKD1Q53R41 847 aaKnown RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 RNF187Q5TA31 235 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 FAM45BPQ6NSW5 357 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 CMC1Q7Z7K0 106 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 DENND6AQ8IWF6 608 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 PLPP6Q8IY26 295 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 PCDH20Q8N6Y1 951 aaKnown RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 TTC16Q8NEE8 873 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 OR4L1Q8NH43 312 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 PPP1R14CQ8TAE6 165 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 FAM45AQ8TCE6 357 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 NELL1Q92832 810 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 ATXN7L3BQ96GX2 97 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 MYO19Q96H55 970 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 MYADMQ96S97 322 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 SIKE1Q9BRV8 207 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 BBS2Q9BXC9 721 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 SMG9Q9H0W8 520 aaKnown RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 ACTR5Q9H9F9 607 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 POPDC3Q9HBV1 291 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 MAGEE1Q9HCI5 957 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 SLCO1B3Q9NPD5 702 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 CATSPERZQ9NTU4 200 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 THAP1Q9NVV9 213 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 COPG2Q9UBF2 871 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 EMCNQ9ULC0 261 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 CCL26Q9Y258 94 aa14.61□□□□□ -0.07
COMMD4-221ENST00000567935 FCF1Q9Y324 198 aaKnown RBP14.61□□□□□ -0.07
COMMD4-221ENST00000567935 H7C0S8 307 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 HTRA2O43464 458 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-221ENST00000567935 GJB3O75712 270 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 DCTN3O75935 186 aa14.6□□□□□ -0.07
COMMD4-221ENST00000567935 PRAMEF12O95522 483 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms