RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 DDX53Q86TM3 631 aaKnown RBP12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 LRRC49Q8IUZ0 686 aa12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 SLC34A3Q8N130 599 aa12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 REPS2Q8NFH8 660 aa12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 PHF10Q8WUB8 498 aaKnown RBP12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 TOP1MTQ969P6 601 aa12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 ASB9Q96DX5 294 aa12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 AGAP2Q99490 1192 aa12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 DYRK1BQ9Y463 629 aa12.4□□□□□ -0.42
CSPG4P13-202ENST00000567704 A0A1W2PQ72 361 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 DHX15O43143 795 aaKnown RBP12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 TYROBPO43914 113 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 NOBOXO60393 691 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 UGT2B4P06133 528 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 MATKP42679 507 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 KPNA1P52294 538 aaPredicted RBP12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 EN1Q05925 392 aaPredicted RBP12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 CAMK2GQ13555 558 aaPredicted RBP12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 STARD3Q14849 445 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 MOGQ16653 247 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 UNC93AQ86WB7 457 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 UNC5BQ8IZJ1 945 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 NAT16Q8N8M0 369 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 DCBLD1Q8N8Z6 715 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 PIK3C3Q8NEB9 887 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 BSNDQ8WZ55 320 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 PANX1Q96RD7 426 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 CD320Q9NPF0 282 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 IGSF9Q9P2J2 1179 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 MFHAS1Q9Y4C4 1052 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 PCDHA2Q9Y5H9 948 aa12.4□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZNF99A8MXY4 864 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 H3BRB1 525 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 RFXANKO14593 260 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 FOXD2O60548 495 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZNF135P52742 658 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ENPEPQ07075 957 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZNF460Q14592 562 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MYLK3Q32MK0 819 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 TXNRD3NBQ6F5E7 133 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 CLHC1Q8NHS4 586 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 POLR1EQ9GZS1 481 aaKnown RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 TUT1Q9H6E5 874 aaKnown RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 PSME2Q9UL46 239 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 PHLPP1O60346 1717 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MON2Q7Z3U7 1717 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MYH8P13535 1937 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 CLTBP09497 229 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZNF286BP0CG31 522 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MTHFD1P11586 935 aaKnown RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 NUP62P37198 522 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 CTSKP43235 329 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 TUBA4AP68366 448 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 KLF1Q13351 362 aaPredicted RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 CRY1Q16526 586 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 SLC27A1Q6PCB7 646 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ZC3H7AQ8IWR0 971 aaKnown RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ELMOD1Q8N336 334 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 CARNMT1Q8N4J0 409 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 GRPEL2Q8TAA5 225 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 SEC14L1Q92503 715 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 DIRAS2Q96HU8 199 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 CMTM6Q9NX76 183 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 TMED5Q9Y3A6 229 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 STX11O75558 287 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 TGFB3P10600 412 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 BCAP31P51572 246 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 WNT3AP56704 352 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 SPIBQ01892 262 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 CPSF6Q16630 551 aaKnown RBP eCLIP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 COLEC12Q5KU26 742 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 GPR158Q5T848 1215 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 NIPAL1Q6NVV3 410 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 KRT74Q7RTS7 529 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 NT5DC4Q86YG4 428 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MPP5Q8N3R9 675 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 TFAP2BQ92481 460 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ROPN1LQ96C74 230 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 SMARCD1Q96GM5 515 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 Q96MT0 163 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MRPL45Q9BRJ2 306 aaKnown RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 TDRD1Q9BXT4 1180 aaKnown RBP12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MUC13Q9H3R2 512 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 PTGFRNQ9P2B2 879 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MYPNQ86TC9 1320 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 PRKD3O94806 890 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 BDNFP23560 247 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 STT3AP46977 705 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 DNASE1L3Q13609 305 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 FNDC8Q8TC99 324 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 C1GALT1C1Q96EU7 318 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 SLC4A9Q96Q91 983 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 SLC39A3Q9BRY0 314 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 COPS4Q9BT78 406 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ATP13A1Q9HD20 1204 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 MTRRQ9UBK8 725 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 ADAMTS6Q9UKP5 1117 aa12.39□□□□□ -0.43
CSPG4P13-202ENST00000567704 TSPAN4O14817 238 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms