RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SNX1Q13596 522 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 INPP5AQ14642 412 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 ACOX1Q15067 660 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 LYSMD3Q7Z3D4 306 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 KDELC2Q7Z4H8 507 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 TMC3Q7Z5M5 1100 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 TTC30BQ8N4P2 665 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 OXR1Q8N573 874 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 PAF1Q8N7H5 531 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 IPMKQ8NFU5 416 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 SAP25Q8TEE9 199 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 RTKNQ9BST9 563 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 APOOQ9BUR5 198 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 ABCG8Q9H221 673 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 TM7SF3Q9NS93 570 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 KLF15Q9UIH9 416 aa12.4□□□□□ -0.42
RNF40-211ENST00000567365 CDV3Q9UKY7 258 aaKnown RBP12.4□□□□□ -0.42
RNF40-211ENST00000567365 MYLKQ15746 1914 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 C1orf232A0A0U1RR37 186 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 RGSL1A5PLK6 1076 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 AURKAO14965 403 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 ZNF185O15231 689 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 CBFA2T3O75081 653 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 AGTP01019 485 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 FGF1P05230 155 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 PIRTP0C851 137 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 GIMD1P0DJR0 217 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 ETS1P14921 441 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 EPHA8P29322 1005 aaPredicted RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 CCT8P50990 548 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 GNG11P61952 73 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 ARHGEF7Q14155 803 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 PNCKQ6P2M8 343 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 TTC27Q6P3X3 843 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 MACC1Q6ZN28 852 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 PTAR1Q7Z6K3 402 aaPredicted RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 PRUNE1Q86TP1 453 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 NRSN1Q8IZ57 195 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 C17orf53Q8N3J3 647 aaPredicted RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 BAHD1Q8TBE0 780 aaPredicted RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 NUS1Q96E22 293 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 PPP1R2P1Q96PQ5 205 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 SRPK1Q96SB4 655 aaKnown RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 TEX101Q9BY14 249 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 TRABDQ9H4I3 376 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 ZFYVE1Q9HBF4 777 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 SMARCAL1Q9NZC9 954 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 ZNF148Q9UQR1 794 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 AAR2Q9Y312 384 aaKnown RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 NEU2Q9Y3R4 380 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 ZNF711Q9Y462 761 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 ZNF106Q9H2Y7 1883 aaKnown RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 TDRD6O60522 2096 aaKnown RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 COL5A1P20908 1838 aaPredicted RBP12.39□□□□□ -0.43
RNF40-211ENST00000567365 NCOR2Q9Y618 2525 aa12.39□□□□□ -0.43
RNF40-211ENST00000567365 PGRMC1O00264 195 aaKnown RBP12.38□□□□□ -0.43
RNF40-211ENST00000567365 YKT6O15498 198 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 AP2A1O95782 977 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 CSF2P04141 144 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 NME1P15531 152 aaKnown RBP12.38□□□□□ -0.43
RNF40-211ENST00000567365 TSHRP16473 764 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 TCP1P17987 556 aaKnown RBP12.38□□□□□ -0.43
RNF40-211ENST00000567365 CSRP1P21291 193 aaKnown RBP12.38□□□□□ -0.43
RNF40-211ENST00000567365 HMGCLP35914 325 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 KCNJ1P48048 391 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 KIAA1024LP59773 190 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 DCDC1P59894 354 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 SEMA5AQ13591 1074 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 PDE1CQ14123 709 aaPredicted RBP12.38□□□□□ -0.43
RNF40-211ENST00000567365 NFATC4Q14934 902 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 HENMT1Q5T8I9 393 aaKnown RBP12.38□□□□□ -0.43
RNF40-211ENST00000567365 KCTD16Q68DU8 428 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 ADAMTSL4Q6UY14 1074 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 ARHGEF18Q6ZSZ5 1173 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 PARGQ86W56 976 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 CREG2Q8IUH2 290 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 SLC25A45Q8N413 288 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 SLC25A41Q8N5S1 370 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 SCAMP4Q969E2 229 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 COX14Q96I36 57 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 AGAP2Q99490 1192 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 FICDQ9BVA6 458 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 LGR4Q9BXB1 951 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 HOMER3Q9NSC5 361 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 CNOT6Q9ULM6 557 aaKnown RBP12.38□□□□□ -0.43
RNF40-211ENST00000567365 SHOC2Q9UQ13 582 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 OR1A2Q9Y585 309 aa12.38□□□□□ -0.43
RNF40-211ENST00000567365 TMEM202A6NGA9 273 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 USP12O75317 370 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 SUN1O94901 812 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 PCCBP05166 539 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 ZSCAN5DPP0CG00 497 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 RPL22P35268 128 aaKnown RBP12.37□□□□□ -0.43
RNF40-211ENST00000567365 BNIP3Q12983 259 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 PRPSAP1Q14558 356 aa12.37□□□□□ -0.43
RNF40-211ENST00000567365 UAP1L1Q3KQV9 507 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms