RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 NR1D2Q14995 579 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 MAPK14Q16539 360 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PDK4Q16654 411 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 RSBN1Q5VWQ0 802 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 FAM91A1Q658Y4 838 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CCSAPQ6IQ19 270 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 POTEHQ6S545 545 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PPTC7Q8NI37 304 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 RIT1Q92963 219 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 LENG9Q96B70 501 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 TBL1YQ9BQ87 522 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PCDH12Q9NPG4 1184 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 ABCC13Q9NSE7 274 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 RAB26Q9ULW5 256 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 IFT52Q9Y366 437 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 IGLV3-22A0A075B6J6 115 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 SMIM35A0A1B0GVV1 85 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 RNASEH2AO75792 299 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 TOP3BO95985 862 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 INHAP05111 366 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 SMIM10L2AP0DMW4 78 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 SMIM10L2BP0DMW5 78 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CRABP2P29373 138 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 DNASE1L1P49184 302 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PER3P56645 1201 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PPIGQ13427 754 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDH13-209ENST00000567109 SAMD4BQ5PRF9 694 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 LRRC38Q5VT99 294 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 SNX20Q7Z614 316 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 METTL3Q86U44 580 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 FAM129CQ86XR2 697 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 SH2D3CQ8N5H7 860 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 ADAM32Q8TC27 787 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 POLR1EQ9GZS1 481 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDH13-209ENST00000567109 C3orf14Q9HBI5 128 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PCDH9Q9HC56 1237 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 DMGDHQ9UI17 866 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 GMEB2Q9UKD1 530 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CORO2BQ9UQ03 480 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 C2CD2Q9Y426 696 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 KNL1Q8NG31 2342 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 LOC100653049A0A140TA62 436 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 ZNF185O15231 689 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 GLUD1P00367 558 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 IDO1P14902 403 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 COMTP21964 271 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 COILP38432 576 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 CHN2P52757 468 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 SEC24CP53992 1094 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 OC90Q02509 493 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 ACSM2AQ08AH3 577 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 USP4Q13107 963 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 DPYSQ14117 519 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 GIT2Q14161 759 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 FBXO46Q6PJ61 603 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 ZNF554Q86TJ5 538 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 JAZF1Q86VZ6 243 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 TDRPQ86YL5 185 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 EFHD2Q96C19 240 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 CELF6Q96J87 481 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 HIPK3Q9H422 1215 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 POLMQ9NP87 494 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 IMP3Q9NV31 184 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 TOR4AQ9NXH8 423 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PHTF1Q9UMS5 762 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 MTCL1Q9Y4B5 1905 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 QSOX1O00391 747 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PEX12O00623 359 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CSH1P0DML2 217 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CSH2P0DML3 217 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 BDH1Q02338 343 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 LRRC34Q8IZ02 419 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 FAM98AQ8NCA5 519 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 EEF1AKMT1Q8WVE0 214 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 PMEPA1Q969W9 287 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 C9orf72Q96LT7 481 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 C5orf34Q96MH7 638 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 SEPHS2Q99611 448 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 IL12RB2Q99665 862 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 HEATR1Q9H583 2144 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 VPS4AQ9UN37 437 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CARD8Q9Y2G2 431 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 NOL4O94818 638 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CATP04040 527 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 SELPP16109 830 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 RPL3P39023 403 aaKnown RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 CTSOP43234 321 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 NPTX2P47972 431 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 ACTR3P61158 418 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 SPANXN2Q5MJ10 180 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CERCAMQ5T4B2 595 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 ATXN7L2Q5T6C5 722 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 MZT2AQ6P582 158 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 ZNF605Q86T29 641 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 ABHD5Q8WTS1 349 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 MLPHQ9BV36 600 aaPredicted RBP6.23□□□□□ -1.41
CDH13-209ENST00000567109 ASB8Q9H765 288 aa6.23□□□□□ -1.41
CDH13-209ENST00000567109 CLN6Q9NWW5 311 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms