RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 PCGF5Q86SE9 256 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 PARGQ86W56 976 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 GATAD2AQ86YP4 633 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 TP53I13Q8NBR0 393 aaPredicted RBP13.46□□□□□ -0.25
CLK3-218ENST00000566926 BTN2A2Q8WVV5 523 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 ANKRD7Q92527 254 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 LRRC45Q96CN5 670 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 RTP4Q96DX8 246 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 QKIQ96PU8 341 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLK3-218ENST00000566926 EPB41L5Q9HCM4 733 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 GPR27Q9NS67 375 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 WHRNQ9P202 907 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 FTSJ1Q9UET6 329 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 ASIC3Q9UHC3 531 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 NEU2Q9Y3R4 380 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 TTLL3Q9Y4R7 772 aa13.46□□□□□ -0.25
CLK3-218ENST00000566926 PTPRBP23467 1997 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 TPRP12270 2363 aaKnown RBP13.45□□□□□ -0.26
CLK3-218ENST00000566926 TTC24A2A3L6 582 aaPredicted RBP13.45□□□□□ -0.26
CLK3-218ENST00000566926 PGLSO95336 258 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 LDOC1O95751 146 aaPredicted RBP13.45□□□□□ -0.26
CLK3-218ENST00000566926 JCHAINP01591 159 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 KRT14P02533 472 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 PRKCGP05129 697 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 ALPPL2P10696 532 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 H2AFXP16104 143 aaPredicted RBP13.45□□□□□ -0.26
CLK3-218ENST00000566926 VIPR1P32241 457 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 IGFALSP35858 605 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 KCNJ1P48048 391 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 EPHB1P54762 984 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 VSNL1P62760 191 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 IFI35P80217 286 aaPredicted RBP13.45□□□□□ -0.26
CLK3-218ENST00000566926 SHC2P98077 582 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 TRAF2Q12933 501 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 FOXC1Q12948 553 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 BNIP3Q12983 259 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 ARHGEF7Q14155 803 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 NAA30Q147X3 362 aaPredicted RBP13.45□□□□□ -0.26
CLK3-218ENST00000566926 P3H1Q32P28 736 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 EMBQ6PCB8 327 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 SLC22A18ASQ8N1D0 253 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 SCRN2Q96FV2 425 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 SNF8Q96H20 258 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 VAT1Q99536 393 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 LGMNQ99538 433 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 IL12RB2Q99665 862 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 ARFGAP3Q9NP61 516 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 DNAJC28Q9NX36 388 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 B4GALT6Q9UBX8 382 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 BTBD3Q9Y2F9 522 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 COQ6Q9Y2Z9 468 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 PPIL1Q9Y3C6 166 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 RAI2Q9Y5P3 530 aa13.45□□□□□ -0.26
CLK3-218ENST00000566926 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 KCNK1O00180 336 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 PSMD11O00231 422 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 PIAS2O75928 621 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 CSF2P04141 144 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 HLA-DQB2P05538 268 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 FTH1P19P0C7X4 201 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 CDK4P11802 303 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 HTR1BP28222 390 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 ADCY8P40145 1251 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 BLKP51451 505 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 RPL26P61254 145 aaKnown RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 DSC2Q02487 901 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 RALGDSQ12967 914 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 MTM1Q13496 603 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 PRKD1Q15139 912 aaPredicted RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 IRF4Q15306 451 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 WSCD2Q2TBF2 565 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 NPNTQ6UXI9 565 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 CCNI2Q6ZMN8 369 aaPredicted RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 ZC3H18Q86VM9 953 aaKnown RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 EID2Q8N6I1 236 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 TMEM121Q9BTD3 319 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 FOXP3Q9BZS1 431 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 MBNL1Q9NR56 388 aaKnown RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 EVA1BQ9NVM1 165 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 PAK5Q9P286 719 aa13.44□□□□□ -0.26
CLK3-218ENST00000566926 SAE1Q9UBE0 346 aaPredicted RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 MTRF1LQ9UGC7 380 aaKnown RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 RPL26L1Q9UNX3 145 aaKnown RBP13.44□□□□□ -0.26
CLK3-218ENST00000566926 FZD6O60353 706 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
CLK3-218ENST00000566926 NME1P15531 152 aaKnown RBP13.43□□□□□ -0.26
CLK3-218ENST00000566926 ZNF30P17039 623 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 KELP23276 732 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 DGKAP23743 735 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 FZD2Q14332 565 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 HLTFQ14527 1009 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLK3-218ENST00000566926 ACOX1Q15067 660 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 KANSL1Q7Z3B3 1105 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 ARRDC2Q8TBH0 407 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 PIH1D2Q8WWB5 315 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 HTR3CQ8WXA8 447 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 ADAMTS14Q8WXS8 1223 aa13.43□□□□□ -0.26
CLK3-218ENST00000566926 CNDP2Q96KP4 475 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms