RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 SATB1Q01826 763 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 GRTP1Q5TC63 336 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 FBXL19Q6PCT2 694 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 ZNF852Q6ZMS4 543 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 MICALCLQ6ZW33 695 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 DENND6AQ8IWF6 608 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 OR4L1Q8NH43 312 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 FBRSQ9HAH7 460 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 CATSPERZQ9NTU4 200 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 H7C0S8 307 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 CNTFP26441 200 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 MMP12P39900 470 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 SUOXP51687 545 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 NEK3P51956 506 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 CSE1LP55060 971 aaKnown RBP18.73■□□□□ 0.59
COMMD4-213ENST00000565834 PRKCQQ04759 706 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 CTBP1Q13363 440 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 HSF5Q4G112 596 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-213ENST00000565834 ZNF776Q68DI1 518 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-213ENST00000565834 MRNIPQ6NTE8 343 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 KIAA1211LQ6NV74 962 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 KIAA0408Q6ZU52 694 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 ERN2Q76MJ5 926 aaKnown RBP18.73■□□□□ 0.59
COMMD4-213ENST00000565834 DPPA4Q7L190 304 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 CNPY4Q8N129 248 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 C2CD4AQ8NCU7 369 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-213ENST00000565834 OR2T3Q8NH03 318 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 RPLP0P6Q8NHW5 317 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 ARHGEF3Q9NR81 526 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 OGFRQ9NZT2 677 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 FBXO5Q9UKT4 447 aa18.73■□□□□ 0.59
COMMD4-213ENST00000565834 FNDC3AQ9Y2H6 1198 aaKnown RBP18.73■□□□□ 0.59
COMMD4-213ENST00000565834 C19orf67A6NJJ6 358 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 CD3EAPO15446 510 aaKnown RBP18.72■□□□□ 0.59
COMMD4-213ENST00000565834 ADH1BP00325 375 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 SNRPAP09012 282 aaKnown RBP18.72■□□□□ 0.59
COMMD4-213ENST00000565834 ADRB3P13945 408 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 MC4RP32245 332 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 SPRP35270 261 aaPredicted RBP18.72■□□□□ 0.59
COMMD4-213ENST00000565834 PTSQ03393 145 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 ELP6Q0PNE2 266 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 CST6Q15828 149 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 FASTKD1Q53R41 847 aaKnown RBP18.72■□□□□ 0.59
COMMD4-213ENST00000565834 CILP2Q8IUL8 1156 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 GPR150Q8NGU9 434 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 MTBPQ96DY7 904 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 SGSM3Q96HU1 749 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 RBBP8Q99708 897 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 HDAC8Q9BY41 377 aa18.72■□□□□ 0.59
COMMD4-213ENST00000565834 MARCH4Q9P2E8 410 aaPredicted RBP18.72■□□□□ 0.59
COMMD4-213ENST00000565834 FOXO6A8MYZ6 492 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 TRIM49D1C9J1S8 452 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 F7P08709 466 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-213ENST00000565834 STC1P52823 247 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 MPP1Q00013 466 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 BMPR2Q13873 1038 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 EOGTQ5NDL2 527 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 TRABD2AQ86V40 505 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 CACUL1Q86Y37 369 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 SRRM1Q8IYB3 904 aaKnown RBP18.71■□□□□ 0.59
COMMD4-213ENST00000565834 CBARPQ8N350 705 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-213ENST00000565834 MZB1Q8WU39 189 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 WNT16Q9UBV4 365 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 FBXL21Q9UKT6 434 aa18.71■□□□□ 0.59
COMMD4-213ENST00000565834 COL6A3P12111 3177 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 A0A1W2PQF6 199 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 PLK4O00444 970 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 MID1O15344 667 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 ITGA2BP08514 1039 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 C1SP09871 688 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 BPIP17213 487 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 OGNP20774 298 aaKnown RBP18.7■□□□□ 0.58
COMMD4-213ENST00000565834 C5AR1P21730 350 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 FOXN2P32314 431 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 SPAM1P38567 509 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 COPAP53621 1224 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 LIMK2P53671 638 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 CNTN1Q12860 1018 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 RALGDSQ12967 914 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 PEX6Q13608 980 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 MROH9Q5TGP6 573 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 SDCCAG8Q86SQ7 713 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-213ENST00000565834 EXOC3L1Q86VI1 746 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 RAB7BQ96AH8 199 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 RHOJQ9H4E5 214 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 PKD2L2Q9NZM6 624 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 SENP1Q9P0U3 644 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 APPL1Q9UKG1 709 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 ITM2BQ9Y287 266 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 MRPS17Q9Y2R5 130 aaKnown RBP18.7■□□□□ 0.58
COMMD4-213ENST00000565834 SLC30A1Q9Y6M5 507 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 LRRK1Q38SD2 2015 aa18.7■□□□□ 0.58
COMMD4-213ENST00000565834 AHSGP02765 367 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 MT-ND3P03897 115 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 COL9A1P20849 921 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 P2RY2P41231 377 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 CD151P48509 253 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 PTPN5P54829 565 aa18.69■□□□□ 0.58
COMMD4-213ENST00000565834 RPS14P62263 151 aaKnown RBP18.69■□□□□ 0.58
COMMD4-213ENST00000565834 XIAPP98170 497 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms