RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 NCEH1Q6PIU2 408 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 TIFABQ6ZNK6 161 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 BTLAQ7Z6A9 289 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 ZSWIM9Q86XI8 627 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 CPXM2Q8N436 756 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 RYBPQ8N488 228 aaPredicted RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 ZNF366Q8N895 744 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 GPATCH11Q8N954 259 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 CCDC63Q8NA47 563 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 OR4K2Q8NGD2 314 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 BRSK1Q8TDC3 778 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 MTBPQ96DY7 904 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 FEM1CQ96JP0 617 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 NUDCD1Q96RS6 583 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 IQCGQ9H095 443 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 EBF3Q9H4W6 596 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 MANSC1Q9H8J5 431 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SLC28A3Q9HAS3 691 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 GPAMQ9HCL2 828 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SSU72Q9NP77 194 aaKnown RBP6.24□□□□□ -1.41
CHD9-217ENST00000565832 ZDHHC4Q9NPG8 344 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 SPHK2Q9NRA0 654 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 FBXO5Q9UKT4 447 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 PHTF1Q9UMS5 762 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 DOCK8Q8NF50 2099 aa6.24□□□□□ -1.41
CHD9-217ENST00000565832 AP3B1O00203 1094 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 EBAG9O00559 213 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 TM9SF1O15321 606 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 SNX3O60493 162 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 GLP2RO95838 553 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 EPOP01588 193 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 HNRNPA1P09651 372 aaKnown RBP eCLIP6.23□□□□□ -1.41
CHD9-217ENST00000565832 NEFHP12036 1026 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 SRCP12931 536 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 TCF3P15923 654 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 CA5AP35218 305 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 SLC6A11P48066 632 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 PRAMEP78395 509 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 DLX2Q07687 328 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 NSUN2Q08J23 767 aaKnown RBP eCLIP6.23□□□□□ -1.41
CHD9-217ENST00000565832 KCNC3Q14003 757 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 USP10Q14694 798 aaKnown RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 RFTN1Q14699 578 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 DUSP6Q16828 381 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 GEN1Q17RS7 908 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 TSNAXIP1Q2TAA8 658 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 INO80DQ53TQ3 878 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 MPP7Q5T2T1 576 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 ZNF783Q6ZMS7 281 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 RAPH1Q70E73 1250 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 OTOAQ7RTW8 1153 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 SRLQ86TD4 932 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 ADIPOR2Q86V24 386 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 C12orf40Q86WS4 652 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 CILP2Q8IUL8 1156 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 BBS5Q8N3I7 341 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 OTUD6BQ8N6M0 293 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 DCAF4L2Q8NA75 395 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 C2CD4AQ8NCU7 369 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 LRRC8CQ8TDW0 803 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 FGF13Q92913 245 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 OMDQ99983 421 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 RETREG1Q9H6L5 497 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 NEUROD4Q9HD90 331 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 ZNF510Q9Y2H8 683 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 VPS13AQ96RL7 3174 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 A0A1W2PNR3 127 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 PENKP01210 267 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 CYBBP04839 570 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 FGF1P05230 155 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 SLC35E2BP0CK96 405 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 ARSAP15289 507 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 HLA-DPA1P20036 260 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 HOXA9P31269 272 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 ARRB2P32121 409 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 CCNFP41002 786 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 CDKN2DP55273 166 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 TAS2R39P59534 338 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 DLG1Q12959 904 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 FRG1Q14331 258 aaKnown RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 CHI3L2Q15782 390 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 POM121L1PQ3SYA9 428 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 FAM219BQ5XKK7 198 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 KIAA0930Q6ICG6 404 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 RETSATQ6NUM9 610 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 TMEM207Q6UWW9 146 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 DPY19L3Q6ZPD9 716 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 EP400NLQ6ZTU2 488 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 GET4Q7L5D6 327 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 GLT6D1Q7Z4J2 308 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 PIM3Q86V86 326 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 C10orf107Q8IVU9 208 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 CCDC117Q8IWD4 279 aaPredicted RBP6.23□□□□□ -1.41
CHD9-217ENST00000565832 CNTN4Q8IWV2 1026 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 NPAS3Q8IXF0 933 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 PIANPQ8IYJ0 282 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 TMEM151AQ8N4L1 468 aa6.23□□□□□ -1.41
CHD9-217ENST00000565832 CHST14Q8NCH0 376 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms