RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 ARHGAP18Q8N392 663 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 NIPA2Q8N8Q9 360 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 HSPH1Q92598 858 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 PGAP3Q96FM1 320 aaPredicted RBP6.26□□□□□ -1.41
UBFD1-204ENST00000565634 LMLNQ96KR4 655 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 PRICKLE1Q96MT3 831 aaPredicted RBP6.26□□□□□ -1.41
UBFD1-204ENST00000565634 PSMB7Q99436 277 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 YIPF2Q9BWQ6 316 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 ACSS3Q9H6R3 686 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 NOL6Q9H6R4 1146 aaKnown RBP6.26□□□□□ -1.41
UBFD1-204ENST00000565634 C10orf88Q9H8K7 445 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 C1GALT1Q9NS00 363 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 EHD2Q9NZN4 543 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 CWC15Q9P013 229 aaKnown RBP6.26□□□□□ -1.41
UBFD1-204ENST00000565634 DEC1Q9P2X7 70 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 UVRAGQ9P2Y5 699 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 SAE1Q9UBE0 346 aaPredicted RBP6.26□□□□□ -1.41
UBFD1-204ENST00000565634 ZNF212Q9UDV6 495 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 IP6K2Q9UHH9 426 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 PLAAQ9Y263 795 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 PRKAB1Q9Y478 270 aa6.26□□□□□ -1.41
UBFD1-204ENST00000565634 MDC1Q14676 2089 aaKnown RBP6.26□□□□□ -1.41
UBFD1-204ENST00000565634 ANKRD36A6QL64 1941 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 CELSR2Q9HCU4 2923 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 A0A1B0GTQ1 180 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 A0A1W2PNU3 283 aaPredicted RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 DRGXA6NNA5 263 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 PPP1R12AO14974 1030 aaPredicted RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 ZNF185O15231 689 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 PCDHGA12O60330 932 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 TBL1XO60907 577 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 SDC3O75056 442 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 ATP1A1P05023 1023 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 RNF224P0DH78 156 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 GOT1P17174 413 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 KDELR1P24390 212 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 CTSKP43235 329 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 AFF3P51826 1226 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 UCNP55089 124 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 COG7P83436 770 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 GAD2Q05329 585 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 PIGHQ14442 188 aaPredicted RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 HSF5Q4G112 596 aaPredicted RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 C3orf38Q5JPI3 329 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 ADGRF1Q5T601 910 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 MANEALQ5VSG8 457 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 FYB2Q5VWT5 728 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 TMEM215Q68D42 235 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 LEKR1Q6ZMV7 388 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 ARHGAP36Q6ZRI8 547 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 POLNQ7Z5Q5 900 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 DAAM2Q86T65 1068 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 RHOT2Q8IXI1 618 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 FAM217AQ8IXS0 508 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 APCDD1Q8J025 514 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 PQLC3Q8N755 202 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 ZNF366Q8N895 744 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 TERB1Q8NA31 727 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 MSANTD4Q8NCY6 345 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 PCDH19Q8TAB3 1148 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 FNIP1Q8TF40 1166 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 SORCS1Q8WY21 1168 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 GOLGA1Q92805 767 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 BIRC7Q96CA5 298 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 SIPA1Q96FS4 1042 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 MS4A14Q96JA4 679 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 ZNF578Q96N58 590 aaPredicted RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 FAM118BQ9BPY3 351 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 HEMGNQ9BXL5 484 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 NACA2Q9H009 215 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 EPN3Q9H201 632 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 GSX1Q9H4S2 264 aaPredicted RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 DHX35Q9H5Z1 703 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 PCDH18Q9HCL0 1135 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 MRPL47Q9HD33 250 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 OLA1Q9NTK5 396 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 DNAJC17Q9NVM6 304 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 USP36Q9P275 1121 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 OR12D3Q9UGF7 316 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 STOML2Q9UJZ1 356 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 INTS6Q9UL03 887 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 VANGL2Q9ULK5 521 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 ZKSCAN5Q9Y2L8 839 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 HBS1LQ9Y450 684 aaKnown RBP6.25□□□□□ -1.41
UBFD1-204ENST00000565634 PCDHB14Q9Y5E9 798 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 PCDHGA1Q9Y5H4 931 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 STON1Q9Y6Q2 735 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 SCINQ9Y6U3 715 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 LRBAP50851 2863 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 BSNQ9UPA5 3926 aa6.25□□□□□ -1.41
UBFD1-204ENST00000565634 TNRC6AQ8NDV7 1962 aaKnown RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 A0A0D9SEW6 157 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CLEC18AA5D8T8 446 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 NEDD8-MDP1E9PL57 170 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 RNF103O00237 685 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 CREB3O43889 395 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
UBFD1-204ENST00000565634 RNF8O76064 485 aa6.24□□□□□ -1.41
UBFD1-204ENST00000565634 LRIG2O94898 1065 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms