RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 HTR3CQ8WXA8 447 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 CENPTQ96BT3 561 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 SCRN2Q96FV2 425 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 QKIQ96PU8 341 aaKnown RBP eCLIP9.65□□□□□ -0.863e-7■■□□□ 13.5
CNOT1-207ENST00000565605 VAT1Q99536 393 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 PCDH9Q9HC56 1237 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 LZTFL1Q9NQ48 299 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 MBNL1Q9NR56 388 aaKnown RBP9.65□□□□□ -0.86
CNOT1-207ENST00000565605 KLHL8Q9P2G9 620 aaPredicted RBP9.65□□□□□ -0.86
CNOT1-207ENST00000565605 DNPEPQ9ULA0 475 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 RPL26L1Q9UNX3 145 aaKnown RBP9.65□□□□□ -0.86
CNOT1-207ENST00000565605 CHKBQ9Y259 395 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 NUMA1Q14980 2115 aa9.65□□□□□ -0.86
CNOT1-207ENST00000565605 CFAP46Q8IYW2 2715 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 CAPN8A6NHC0 703 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 NPIPB15A6NHN6 443 aaPredicted RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 EIF4E1BA6NMX2 242 aaKnown RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 H3BM21 787 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 PSMD11O00231 422 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 DDX3YO15523 660 aaKnown RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 MAP3K7O43318 606 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 WIPF1O43516 503 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 ZNF189O75820 626 aaPredicted RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 RECQL5O94762 991 aaPredicted RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 STK10O94804 968 aaKnown RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 HEXIM1O94992 359 aaKnown RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 PCCBP05166 539 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 PDHA1P08559 390 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 ALPIP09923 528 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 PTPN3P26045 913 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 ITPKBP27987 946 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 GRK6P43250 576 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 CLDN6P56747 220 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 EIF3EP60228 445 aaKnown RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 YPEL5P62699 121 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 OTUD4Q01804 1114 aaKnown RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 MTM1Q13496 603 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 SHBQ15464 509 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 SMAD1Q15797 465 aaKnown RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 SLC14A2Q15849 920 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 CNGA3Q16281 694 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 WSCD2Q2TBF2 565 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 CCDC157Q569K6 752 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 SEL1L2Q5TEA6 688 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 AADACL2Q6P093 401 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 KDM7AQ6ZMT4 941 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 PID1Q7Z2X4 250 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 GATAD2AQ86YP4 633 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 SLC22A18ASQ8N1D0 253 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 TTC13Q8NBP0 860 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 ACTL9Q8TC94 416 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 SAP25Q8TEE9 199 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 PIH1D2Q8WWB5 315 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 NUS1Q96E22 293 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 IFT43Q96FT9 208 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 IMP4Q96G21 291 aaKnown RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 HES6Q96HZ4 224 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 TEKT5Q96M29 485 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 MCCC1Q96RQ3 725 aaPredicted RBP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 RBM15Q96T37 977 aaKnown RBP eCLIP9.64□□□□□ -0.87
CNOT1-207ENST00000565605 CDC6Q99741 560 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 ADGRE3Q9BY15 652 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 SLC25A51Q9H1U9 297 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 GLOD4Q9HC38 313 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 GPR27Q9NS67 375 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 DNAJC28Q9NX36 388 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 KCTD5Q9NXV2 234 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 PPIL1Q9Y3C6 166 aa9.64□□□□□ -0.87
CNOT1-207ENST00000565605 TENM4Q6N022 2769 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 A0A0J9YYE9 177 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 SPTY2D1-AS1A0A0U1RR47 76 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 SDC3O75056 442 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 TRBC1P01850 177 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 MMP2P08253 660 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 RBP3P10745 1247 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 ZNF30P17039 623 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 NFKB1P19838 968 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 LHCGRP22888 699 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 HTR1BP28222 390 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 RBL1P28749 1068 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 HNF1BP35680 557 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 TNNT3P45378 269 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-207ENST00000565605 HNRNPKP61978 463 aaKnown RBP eCLIP9.63□□□□□ -0.87
CNOT1-207ENST00000565605 WASHC5Q12768 1159 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 BNIP3Q12983 259 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 FZD2Q14332 565 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 IHHQ14623 411 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 INPP5AQ14642 412 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 RPS6KA1Q15418 735 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 PCSK7Q16549 785 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 HS1BP3Q53T59 392 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 LRRC66Q68CR7 880 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 ITPRIPL1Q6GPH6 555 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 CCDC70Q6NSX1 233 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 DARS2Q6PI48 645 aaKnown RBP9.63□□□□□ -0.87
CNOT1-207ENST00000565605 CRTC1Q6UUV9 634 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 DHRS13Q6UX07 377 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 MACC1Q6ZN28 852 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 GALNT15Q8N3T1 639 aa9.63□□□□□ -0.87
CNOT1-207ENST00000565605 TRIM58Q8NG06 486 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms