RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KRT75O95678 551 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 TGFBR1P36897 503 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 SEPHS1P49903 392 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 GEN1Q17RS7 908 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 DUSP28Q4G0W2 176 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 CATSPEREQ5SY80 951 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 CCNYL2Q5T2Q4 361 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 CEP97Q8IW35 865 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 RAB2BQ8WUD1 216 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 DNAJB3Q8WWF6 145 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 FKBP10Q96AY3 582 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 CENPNQ96H22 339 aaPredicted RBP16.3■□□□□ 0.2
LINC00554-201ENST00000564841 CSPG4P5Q96PW8 444 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 KCTD15Q96SI1 283 aaPredicted RBP16.3■□□□□ 0.2
LINC00554-201ENST00000564841 ARPC5LQ9BPX5 153 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 C9orf16Q9BUW7 83 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 KATNBL1Q9H079 304 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 ING2Q9H160 280 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 PTPRHQ9HD43 1115 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 AKIP1Q9NQ31 210 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 TMEM9Q9P0T7 183 aa16.3■□□□□ 0.2
LINC00554-201ENST00000564841 CCDC162PA2VCL2 907 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 NR5A2O00482 541 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 CILPO75339 1184 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 DDHD2O94830 711 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 IL10P22301 178 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ADSLP30566 484 aaPredicted RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ZBTB17Q13105 803 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 GRB14Q14449 540 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 FAM110CQ1W6H9 321 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 SLC10A6Q3KNW5 377 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 MARCH8Q5T0T0 291 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 PID1Q7Z2X4 250 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ADGRG5Q8IZF4 528 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 NDNFQ8TB73 568 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 KIF12Q96FN5 646 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 DUS3LQ96G46 650 aaKnown RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 TRPV5Q9NQA5 729 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 SNTG2Q9NY99 539 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 VTI1BQ9UEU0 232 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 PTGES3LE9PB15 166 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 MPOP05164 745 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 SLC35E2BP0CK96 405 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 SDC4P31431 198 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ENPEPQ07075 957 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 DPY19L1Q2PZI1 675 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 UGT3A1Q6NUS8 523 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ZNF567Q8N184 647 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 SLC7A14Q8TBB6 771 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 TOP1MTQ969P6 601 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 SDCCAG3Q96C92 435 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 IL22Q9GZX6 179 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 GDAP2Q9NXN4 497 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 MAP10Q9P2G4 905 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 TNFSF13BQ9Y275 285 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 IFT52Q9Y366 437 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 RAD54BQ9Y620 910 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 TANC1Q9C0D5 1861 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ZFC3H1O60293 1989 aaKnown RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 GABBR2O75899 941 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 CABYRO75952 493 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 HTR1AP08908 422 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ENO2P09104 434 aaPredicted RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 PPP1R8Q12972 351 aaKnown RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 PLEKHG7Q6ZR37 379 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 FAM131BQ86XD5 332 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ZCCHC7Q8N3Z6 543 aaKnown RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 TERB1Q8NA31 727 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ANKRD52Q8NB46 1076 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 EFHD2Q96C19 240 aaPredicted RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 ZIC5Q96T25 663 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 OSBPL10Q9BXB5 764 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 HOXD1Q9GZZ0 328 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 POMKQ9H5K3 350 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 GPN2Q9H9Y4 310 aaPredicted RBP16.29■□□□□ 0.2
LINC00554-201ENST00000564841 HMG20AQ9NP66 347 aa16.29■□□□□ 0.2
LINC00554-201ENST00000564841 PCNAP12004 261 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 PSMA4P25789 261 aaKnown RBP16.28■□□□□ 0.2
LINC00554-201ENST00000564841 NMBRP28336 390 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 CD68P34810 354 aaPredicted RBP16.28■□□□□ 0.2
LINC00554-201ENST00000564841 PITX1P78337 314 aaPredicted RBP16.28■□□□□ 0.2
LINC00554-201ENST00000564841 MPP1Q00013 466 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 POU5F1BQ06416 359 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 CTBP1Q13363 440 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 FUT11Q495W5 492 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 TLK2Q86UE8 772 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 KCNMB4Q86W47 210 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 HEATR4Q86WZ0 1026 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 MMAAQ8IVH4 418 aaKnown RBP16.28■□□□□ 0.2
LINC00554-201ENST00000564841 SPARTQ8N0X7 666 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 PSMA8Q8TAA3 256 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 ISL2Q96A47 359 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 MAELQ96JY0 434 aaKnown RBP16.28■□□□□ 0.2
LINC00554-201ENST00000564841 ABCB10Q9NRK6 738 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 CMTM6Q9NX76 183 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 KPNA6O60684 536 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 PGK1P00558 417 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 PFKMP08237 780 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms