RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RHDQ02161 417 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 ILF3Q12906 894 aaKnown RBP eCLIP14.99□□□□□ -0.018e-6■■□□□ 11.6
SPG7-210ENST00000564409 TRIM14Q14142 442 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 DPYSL3Q14195 570 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 HLTFQ14527 1009 aaKnown RBP eCLIP14.99□□□□□ -0.01
SPG7-210ENST00000564409 SLC18A3Q16572 532 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 ANKRD20A8PQ5CZ79 823 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 SPECC1LQ69YQ0 1117 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 ZNF765Q7L2R6 523 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 HEATR4Q86WZ0 1026 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 KCTD6Q8NC69 237 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 SEMA3CQ99985 751 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 FRMD8Q9BZ67 464 aaPredicted RBP14.99□□□□□ -0.01
SPG7-210ENST00000564409 DPEP2Q9H4A9 486 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 NT5MQ9NPB1 228 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 MRPL40Q9NQ50 206 aaKnown RBP14.99□□□□□ -0.01
SPG7-210ENST00000564409 CTTNBP2NLQ9P2B4 639 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 RPL26L1Q9UNX3 145 aaKnown RBP14.99□□□□□ -0.01
SPG7-210ENST00000564409 PCDHGA7Q9Y5G6 932 aa14.99□□□□□ -0.01
SPG7-210ENST00000564409 A0A1W2PQM1 296 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 TTC24A2A3L6 582 aaPredicted RBP14.98□□□□□ -0.01
SPG7-210ENST00000564409 NPIPB15A6NHN6 443 aaPredicted RBP14.98□□□□□ -0.01
SPG7-210ENST00000564409 ZNF487B1APH4 448 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 ERVH48-1M5A8F1 160 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 KLK10O43240 276 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 FZD6O60353 706 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 CEACAM5P06731 702 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 IVLP07476 585 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 LHCGRP22888 699 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 CASP14P31944 242 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 ETV3P41162 512 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 MAXP61244 160 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 CDK3Q00526 305 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 MMRN1Q13201 1228 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 Q6ZVL8 140 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 RAB11FIP2Q7L804 512 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 HSD11B1LQ7Z5J1 315 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 TECPR1Q7Z6L1 1165 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 C17orf82Q86X59 251 aaPredicted RBP14.98□□□□□ -0.01
SPG7-210ENST00000564409 VSIG1Q86XK7 387 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 NRSN1Q8IZ57 195 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 FBXO39Q8N4B4 442 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 PIH1D2Q8WWB5 315 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 SLC39A7Q92504 469 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 FAF2Q96CS3 445 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 NAF1Q96HR8 494 aaKnown RBP14.98□□□□□ -0.01
SPG7-210ENST00000564409 B3GNT4Q9C0J1 378 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 CARS2Q9HA77 564 aaKnown RBP14.98□□□□□ -0.01
SPG7-210ENST00000564409 LRIT1Q9P2V4 623 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 RABGEF1Q9UJ41 708 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 MOSPD1Q9UJG1 213 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 ACSL6Q9UKU0 697 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 SLC17A4Q9Y2C5 497 aa14.98□□□□□ -0.01
SPG7-210ENST00000564409 A0A0J9YYE9 177 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 SSU72P8A0A1W2PR75 194 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 CBFA2T2O43439 604 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 MFSD11O43934 449 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 TRBC1P01850 177 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 CD48P09326 243 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 EPHB1P54762 984 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 ZFP36L1Q07352 338 aaKnown RBP14.97□□□□□ -0.01
SPG7-210ENST00000564409 ITKQ08881 620 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 VAC14Q08AM6 782 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 C19orf57Q0VDD7 668 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 TCEA2Q15560 299 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 SKOR2Q2VWA4 1001 aaPredicted RBP14.97□□□□□ -0.01
SPG7-210ENST00000564409 DENND2CQ68D51 928 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 KCTD16Q68DU8 428 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 NCBP2-AS2Q69YL0 99 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 RAET1GQ6H3X3 334 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 ADAMTSL4Q6UY14 1074 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 SPRED1Q7Z699 444 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 OR8K1Q8NGG5 319 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 SCARF2Q96GP6 870 aaPredicted RBP14.97□□□□□ -0.01
SPG7-210ENST00000564409 DNAJC7Q99615 494 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 CDH19Q9H159 772 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 EPB41L5Q9HCM4 733 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 RBM22Q9NW64 420 aaKnown RBP eCLIP14.97□□□□□ -0.011e-6■□□□□ 9.2
SPG7-210ENST00000564409 ZNHIT6Q9NWK9 470 aaKnown RBP14.97□□□□□ -0.01
SPG7-210ENST00000564409 AHCTF1Q8WYP5 2266 aa14.97□□□□□ -0.01
SPG7-210ENST00000564409 LOC400499M0QZD8 3231 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 B4DGG1 531 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 NVLO15381 856 aaKnown RBP14.96□□□□□ -0.01
SPG7-210ENST00000564409 TPM1P09493 284 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 UGT1A5P35504 534 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 GPR3P46089 330 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 GPR1P46091 355 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 NR1D2Q14995 579 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 LRRC66Q68CR7 880 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 FOXR1Q6PIV2 292 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 NYAP1Q6ZVC0 841 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 ZNF438Q7Z4V0 828 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 B3GNT8Q7Z7M8 397 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 TSPAN33Q86UF1 283 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 PELI3Q8N2H9 469 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 AP2M1Q96CW1 435 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 HDAC11Q96DB2 347 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 ZNF830Q96NB3 372 aaPredicted RBP14.96□□□□□ -0.01
SPG7-210ENST00000564409 LYSMD1Q96S90 227 aa14.96□□□□□ -0.01
SPG7-210ENST00000564409 ANP32EQ9BTT0 268 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms