RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 PKP3Q9Y446 797 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 PCDHGC4Q9Y5F7 938 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 ACTL7AQ9Y615 435 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 SCN8AQ9UQD0 1980 aa9.72□□□□□ -0.85
UBFD1-202ENST00000563366 WASH3PC4AMC7 463 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 H7C0S8 307 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 HTRA2O43464 458 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 UGT1A9O60656 530 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 ASMTLO95671 621 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 MT-CO1P00395 513 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 PRLP01236 227 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 APOA4P06727 396 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 DLDP09622 509 aaKnown RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 COL6A2P12110 1019 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CREB1P16220 341 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 PCSK2P16519 638 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 ARNTP27540 789 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CRHR1P34998 444 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 RPA3P35244 121 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 PPARGP37231 505 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 SLC1A2P43004 574 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 LEPRP48357 1165 aaKnown RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 NUMBP49757 651 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 IDH3AP50213 366 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 NEK3P51956 506 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 ZNF140P52738 457 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 SLC12A2P55011 1212 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 POU4F1Q01851 419 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 PTSQ03393 145 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 BMPR2Q13873 1038 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 IHHQ14623 411 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 PDK4Q16654 411 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CCDC153Q494R4 210 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CARD16Q5EG05 197 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 ATXN7L2Q5T6C5 722 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 GRAMD4Q6IC98 578 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 FSTL4Q6MZW2 842 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 SYCE2Q6PIF2 218 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 LVRNQ6Q4G3 990 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 RGS9BPQ6ZS82 235 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 SH2D5Q6ZV89 423 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 USP45Q70EL2 814 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CPLX4Q7Z7G2 160 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 ADIPOR2Q86V24 386 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 ZC3HC1Q86WB0 502 aaKnown RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 MFSD6LQ8IWD5 586 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 RYBPQ8N488 228 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 OTUD6BQ8N6M0 293 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 GPR150Q8NGU9 434 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 RAB3IL1Q8TBN0 382 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 MGARPQ8TDB4 240 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 TCP10LQ8TDR4 215 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 DENND1AQ8TEH3 1009 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 UCMAQ8WVF2 138 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CKAP2Q8WWK9 683 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 SREK1Q8WXA9 508 aaKnown RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.71□□□□□ -0.868e-6■■■□□ 18.3
UBFD1-202ENST00000563366 ELSPBP1Q96BH3 223 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 GRAMD1AQ96CP6 724 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 SERAC1Q96JX3 654 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CITED4Q96RK1 184 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 AGAP2Q99490 1192 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 TTC1Q99614 292 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 FAM83CQ9BQN1 747 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 MCMBPQ9BTE3 642 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 UGT1A7Q9HAW7 530 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 UGT1A10Q9HAW8 530 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 UGT1A8Q9HAW9 530 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CATSPERZQ9NTU4 200 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 PCMTD2Q9NV79 361 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 INTS10Q9NVR2 710 aaKnown RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 GMPR2Q9P2T1 348 aaKnown RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 HECAQ9UBI9 543 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 EVLQ9UI08 416 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-202ENST00000563366 TLK1Q9UKI8 766 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 FBXO5Q9UKT4 447 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 CLEC4EQ9ULY5 219 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 PHTF1Q9UMS5 762 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 ERVW-1Q9UQF0 538 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 PSAT1Q9Y617 370 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 DOCK8Q8NF50 2099 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 COL4A3Q01955 1670 aa9.71□□□□□ -0.86
UBFD1-202ENST00000563366 MUC22E2RYF6 1773 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 A0A0J9YYE9 177 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 HMX2A2RU54 273 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 CAPN8A6NHC0 703 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 GOLGA8RI6L899 631 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 K7ERQ8 282 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 TRAFD1O14545 582 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 TPP1O14773 563 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 STX7O15400 261 aaKnown RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 SMAD6O43541 496 aaKnown RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 GJB3O75712 270 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 TRBC1P01850 177 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 ALDOAP04075 364 aaKnown RBP9.7□□□□□ -0.86
UBFD1-202ENST00000563366 PDHA1P08559 390 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 STMN1P16949 149 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 PSMC3P17980 439 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 FCARP24071 287 aa9.7□□□□□ -0.86
UBFD1-202ENST00000563366 CRABP2P29373 138 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms