RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 NENFQ9UMX5 172 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 FAM96BQ9Y3D0 163 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 PTRH2Q9Y3E5 179 aaKnown RBP3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 ZNF711Q9Y462 761 aa3.34□□□□□ -1.87
SHCBP1-202ENST00000563219 A0A1W2PQF6 199 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 TTC36A6NLP5 189 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 USP17L23D6RBM5 183 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 WNT9BO14905 357 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 SMAD6O43541 496 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 PAGE4O60829 102 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 DKC1O60832 514 aaKnown RBP eCLIP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 ENTPD3O75355 529 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 OR2C1O95371 312 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 TFPIP10646 304 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 GLULP15104 373 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 NAGAP17050 411 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 ARRB2P32121 409 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 NRIP1P48552 1158 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 HTR6P50406 440 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 CLCN3P51790 818 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 PMS2P54278 862 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 UBXN2AP68543 259 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 Q0VFX4 171 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 CDC16Q13042 620 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 FGFBP1Q14512 234 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 HNF4GQ14541 408 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 SHBQ15464 509 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 FAM133BQ5BKY9 247 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 PRAMEF19Q5SWL8 479 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 GPR139Q6DWJ6 353 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 SHQ1Q6PI26 577 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 LCTLQ6UWM7 567 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 DLK2Q6UY11 383 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 DNAJB7Q7Z6W7 309 aaPredicted RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 NOXA1Q86UR1 476 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 PALB2Q86YC2 1186 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 TEX11Q8IYF3 940 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 ADGRF2Q8IZF7 708 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 PARP16Q8N5Y8 322 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 POMGNT1Q8WZA1 660 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 SECISBP2LQ93073 1101 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 FBXL8Q96CD0 374 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 FEM1CQ96JP0 617 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 CAMK1GQ96NX5 476 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 APOL6Q9BWW8 343 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 STRA6Q9BX79 667 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 IFIH1Q9BYX4 1025 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 DCLK3Q9C098 648 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 CCDC177Q9NQR7 707 aaPredicted RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 SH3GLB2Q9NR46 395 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 MRPL15Q9P015 296 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 HAO1Q9UJM8 370 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 FZD10Q9ULW2 581 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 NOL7Q9UMY1 257 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 NFE2L3Q9Y4A8 694 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 FAM169AQ9Y6X4 670 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 UTYO14607 1347 aa3.33□□□□□ -1.88
SHCBP1-202ENST00000563219 TTC3P53804 2025 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 IGHV4-28A0A0C4DH34 117 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 CLEC18AA5D8T8 446 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 OR6C75A6NL08 312 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 INAFM1C9JVW0 142 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 PRR23D1E9PI22 279 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SH2B2O14492 632 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 ASAP2O43150 1006 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SEC14L5O43304 696 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 NDUFB4O95168 129 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 HSPA4LO95757 839 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 PRR23D2P0DMB1 279 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 ETFAP13804 333 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 GABRB1P18505 474 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SAT1P21673 171 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 GPTP24298 496 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 HOXD3P31249 432 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 CDAP32320 146 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 PSMB10P40306 273 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 UBA7P41226 1012 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 PIK3CAP42336 1068 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 PPP5CP53041 499 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 NUDT6P53370 316 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 MFAP4P55083 255 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 ABATP80404 500 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 EPS8Q12929 822 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 CSTF3Q12996 717 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 IKQ13123 557 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 MYBPC2Q14324 1141 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 ARHGEF6Q15052 776 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 TCTN1Q2MV58 587 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SGO1Q5FBB7 561 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 FSCBQ5H9T9 825 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 RAB41Q5JT25 222 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 FNBP1LQ5T0N5 605 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 RPUSD3Q6P087 351 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 C8orf82Q6P1X6 216 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 FBXO46Q6PJ61 603 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 LINGO2Q7L985 606 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 GSTA5Q7RTV2 222 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 HAPLN4Q86UW8 402 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 ARHGAP12Q8IWW6 846 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 MB21D2Q8IYB1 491 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms