RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 PSMD11O00231 422 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 BUD23O43709 281 aaKnown RBP17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 FOXD2O60548 495 aaPredicted RBP17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 GOLGA6DP0CG33 693 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 HLA-DPA1P20036 260 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 CASQ1P31415 396 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 TNNT3P45378 269 aaPredicted RBP17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 OVGP1Q12889 678 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 SHBQ15464 509 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 CYP1B1Q16678 543 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 RSPO4Q2I0M5 234 aaPredicted RBP17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 PNCKQ6P2M8 343 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 TMC3Q7Z5M5 1100 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 ATL2Q8NHH9 583 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 BLOC1S5Q8TDH9 187 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 APOOQ9BUR5 198 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 GPR63Q9BZJ6 419 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 BPIFA1Q9NP55 256 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 GDF3Q9NR23 364 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 RAB6BQ9NRW1 208 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 GPR27Q9NS67 375 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 GOLGA6AQ9NYA3 693 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 PNMA8BQ9ULN7 279 aaPredicted RBP17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 CABIN1Q9Y6J0 2220 aa17.43■□□□□ 0.38
CCNDBP1-204ENST00000563065 DCHS1Q96JQ0 3298 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 TP53BP1Q12888 1972 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 TPH1P17752 444 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 ACTN2P35609 894 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 RABIFP47224 123 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 SPINT3P49223 89 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 TERF1P54274 439 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 MSLNQ13421 630 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 FZD2Q14332 565 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 ZNF423Q2M1K9 1284 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 CCDC137Q6PK04 289 aaKnown RBP17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 IL27RAQ6UWB1 636 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 CCHCR1Q8TD31 782 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 TRIM44Q96DX7 344 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 C16orf45Q96MC5 204 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 ELF4Q99607 663 aaPredicted RBP17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 RIOK2Q9BVS4 552 aaKnown RBP17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 LGR4Q9BXB1 951 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 PAK5Q9P286 719 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 KLF15Q9UIH9 416 aa17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 ASCC3Q8N3C0 2202 aaKnown RBP17.42■□□□□ 0.38
CCNDBP1-204ENST00000563065 SPTY2D1-AS1A0A0U1RR47 76 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 PHF2O75151 1096 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 AP2A1O95782 977 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 CER1O95813 267 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 SOD1P00441 154 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 FGF1P05230 155 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 GRIA1P42261 906 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 VPS41P49754 854 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 ARHGAP8P85298 464 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 BNIP3Q12983 259 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 PTPRCAPQ14761 206 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 HS1BP3Q53T59 392 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 KCTD16Q68DU8 428 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 ESRP1Q6NXG1 681 aaKnown RBP17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 TTC30BQ8N4P2 665 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 GPR26Q8NDV2 337 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 AP2M1Q96CW1 435 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 DNAAF2Q9NVR5 837 aaKnown RBP17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 KCTD3Q9Y597 815 aa17.41■□□□□ 0.38
CCNDBP1-204ENST00000563065 A0A1B0GTQ1 180 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 MAGEC1O60732 1142 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 TRIM23P36406 574 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 FDFT1P37268 417 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 EIF2B5Q13144 721 aaKnown RBP17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 MTM1Q13496 603 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 ALS2CLQ60I27 953 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 RAET1GQ6H3X3 334 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 GATAD2AQ86YP4 633 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 FAM174AQ8TBP5 190 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 NETO1Q8TDF5 533 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 PPP1R2P1Q96PQ5 205 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 DDX47Q9H0S4 455 aaKnown RBP17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 LRRC40Q9H9A6 602 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 TM7SF3Q9NS93 570 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 ARL5AQ9Y689 179 aa17.4■□□□□ 0.38
CCNDBP1-204ENST00000563065 TDRD6O60522 2096 aaKnown RBP17.39■□□□□ 0.38
CCNDBP1-204ENST00000563065 SCAMP1O15126 338 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 SDC3O75056 442 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 KRT14P02533 472 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 CD59P13987 128 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 BPIP17213 487 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 THOP1P52888 689 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 LIMK1P53667 647 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 YPEL5P62699 121 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 DPTQ07507 201 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 SEMA5AQ13591 1074 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 GLT6D1Q7Z4J2 308 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 HEATR4Q86WZ0 1026 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 NRSN1Q8IZ57 195 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 OR52K1Q8NGK4 314 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 TCEAL2Q9H3H9 227 aaPredicted RBP17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 FAM83DQ9H4H8 585 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 ERVMER34-1Q9H9K5 563 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 ARNT2Q9HBZ2 717 aa17.39■□□□□ 0.37
CCNDBP1-204ENST00000563065 DNAJC28Q9NX36 388 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms