RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 OASLQ15646 514 aaKnown RBP13.88□□□□□ -0.19
TPM1-230ENST00000561266 TRIP6Q15654 476 aaKnown RBP13.88□□□□□ -0.19
TPM1-230ENST00000561266 ALG11Q2TAA5 492 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 SIRPB2Q5JXA9 342 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 MACC1Q6ZN28 852 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 MICALCLQ6ZW33 695 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 PARGQ86W56 976 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 DCP2Q8IU60 420 aaKnown RBP13.88□□□□□ -0.19
TPM1-230ENST00000561266 SLC25A41Q8N5S1 370 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 PNPLA1Q8N8W4 532 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 GLIS1Q8NBF1 620 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 FAM174AQ8TBP5 190 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 OR1E3Q8WZA6 343 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 VAT1Q99536 393 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 APOL2Q9BQE5 337 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 CLPBQ9H078 707 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 GBA3Q9H227 469 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 FGF22Q9HCT0 170 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 RSPH14Q9UHP6 348 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 TRHDEQ9UKU6 1024 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 WASF3Q9UPY6 502 aa13.88□□□□□ -0.19
TPM1-230ENST00000561266 C1orf232A0A0U1RR37 186 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 FFAR2O15552 330 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 LIASO43766 372 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 PTMAP06454 111 aaKnown RBP13.87□□□□□ -0.19
TPM1-230ENST00000561266 ETS1P14921 441 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 JUNDP17535 347 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 ADRA1AP35348 466 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 THOP1P52888 689 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 SIM1P81133 766 aaPredicted RBP13.87□□□□□ -0.19
TPM1-230ENST00000561266 DNAJC3Q13217 504 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 MSLNQ13421 630 aaPredicted RBP13.87□□□□□ -0.19
TPM1-230ENST00000561266 SNX1Q13596 522 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 SPARCL1Q14515 664 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 SEL1L2Q5TEA6 688 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 FAXCQ5TGI0 409 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 ENPP7Q6UWV6 458 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 ERMP1Q7Z2K6 904 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 TMC3Q7Z5M5 1100 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 TRIM74Q86UV6 250 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 HEATR4Q86WZ0 1026 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 SLC35F6Q8N357 371 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 OXR1Q8N573 874 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 TAB3Q8N5C8 712 aaPredicted RBP13.87□□□□□ -0.19
TPM1-230ENST00000561266 IPMKQ8NFU5 416 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 TRIM58Q8NG06 486 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 PDXPQ96GD0 296 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 SPATA13Q96N96 652 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 ALS2CR12Q96Q35 445 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 RIOK2Q9BVS4 552 aaKnown RBP13.87□□□□□ -0.19
TPM1-230ENST00000561266 CARD9Q9H257 536 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 HAUS2Q9NVX0 235 aa13.87□□□□□ -0.19
TPM1-230ENST00000561266 CNOT6Q9ULM6 557 aaKnown RBP13.87□□□□□ -0.19
TPM1-230ENST00000561266 PCYT1BQ9Y5K3 369 aaPredicted RBP13.87□□□□□ -0.19
TPM1-230ENST00000561266 ZFC3H1O60293 1989 aaKnown RBP13.87□□□□□ -0.19
TPM1-230ENST00000561266 RP1P56715 2156 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 LY6G6EA0A0G2JKS1 128 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 C5orf60A6NFR6 353 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 FADS2P1A8MWK0 482 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 SIGLEC6O43699 453 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 ATP1A1P05023 1023 aaKnown RBP13.86□□□□□ -0.19
TPM1-230ENST00000561266 ADRB1P08588 477 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 ZNF30P17039 623 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 SPINK2P20155 84 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 CA4P22748 312 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 CA5AP35218 305 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 GRK6P43250 576 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 POLD2P49005 469 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 SPINT3P49223 89 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 KIAA1024LP59773 190 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 DPTQ07507 201 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 PTPRCAPQ14761 206 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 SUZ12Q15022 739 aaKnown RBP13.86□□□□□ -0.19
TPM1-230ENST00000561266 SLC1A5Q15758 541 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 ZNF569Q5MCW4 686 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 DENND5AQ6IQ26 1287 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 RD3Q7Z3Z2 195 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 GLRX5Q86SX6 157 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 KLHDC8BQ8IXV7 354 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 TTC30BQ8N4P2 665 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 TTC13Q8NBP0 860 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 GPR26Q8NDV2 337 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 ZNF548Q8NEK5 533 aaPredicted RBP13.86□□□□□ -0.19
TPM1-230ENST00000561266 MS4A14Q96JA4 679 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 LRRC61Q9BV99 259 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 FICDQ9BVA6 458 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 TEX101Q9BY14 249 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 ADGRE3Q9BY15 652 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 SLC32A1Q9H598 525 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 MAGEE1Q9HCI5 957 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 SMARCAL1Q9NZC9 954 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 ZNF711Q9Y462 761 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 ST14Q9Y5Y6 855 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 U3KQA8 63 aa13.86□□□□□ -0.19
TPM1-230ENST00000561266 GOLGA6CA6NDK9 693 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 GOLGA6BA6NDN3 693 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 GOLGA6L9A6NEM1 432 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 TOR1BO14657 336 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms