RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ITGB1P05556 798 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 POLBP06746 335 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 HSPA8P11142 646 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 ZNF182P17025 639 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 CST5P28325 142 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TYK2P29597 1187 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 CD68P34810 354 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 RPL14P50914 215 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 CD300CQ08708 224 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 PRKAA1Q13131 559 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 STX5Q13190 355 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 MAPRE1Q15691 268 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 KCTD11Q693B1 232 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 ZNF598Q86UK7 904 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 RDH11Q8TC12 318 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 MLPHQ9BV36 600 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TRIM62Q9BVG3 475 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 OSBPL2Q9H1P3 480 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 RAD21L1Q9H4I0 556 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 CASS4Q9NQ75 786 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 TRMT13Q9NUP7 481 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 PKD2L2Q9NZM6 624 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 PSAT1Q9Y617 370 aa13.98□□□□□ -0.17
RABGGTA-220ENST00000560998 SEC14L2O76054 403 aa13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 ATXN3P54252 364 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 EIF4EBP2Q13542 120 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 CES3Q6UWW8 571 aa13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 ANKRD13BQ86YJ7 626 aa13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 DPF3Q92784 378 aa13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 RNF34Q969K3 372 aa13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 PPWD1Q96BP3 646 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 FCRL3Q96P31 734 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 TRIM15Q9C019 465 aa13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 IL22Q9GZX6 179 aa13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 SPAG4Q9NPE6 437 aa13.97□□□□□ -0.17
RABGGTA-220ENST00000560998 ERI2A8K979 691 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 F8W810 466 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 G3V2L1 256 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 SLC22A1O15245 554 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 INPPL1O15357 1258 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 USP12O75317 370 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 MPOP05164 745 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 ERVK-10P10266 1014 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 TYMPP19971 482 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 CYP2C18P33260 490 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 GP5P40197 560 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 TSPY1Q01534 308 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 NSUN2Q08J23 767 aaKnown RBP eCLIP13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 SAMD4BQ5PRF9 694 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 GRTP1Q5TC63 336 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 ZNF773Q6PK81 442 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 LPGAT1Q92604 370 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 CERS2Q96G23 380 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 VAT1Q99536 393 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 NAA50Q9GZZ1 169 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 TXNDC16Q9P2K2 825 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 VANGL2Q9ULK5 521 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 NEU3Q9UQ49 428 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 CARD8Q9Y2G2 431 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 ATP11BQ9Y2G3 1177 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 FRMPD3Q5JV73 1810 aa13.96□□□□□ -0.17
RABGGTA-220ENST00000560998 ANKRD34BA5PLL1 514 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 TNFRSF10AO00220 468 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 DLGAP1O14490 977 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 IRAK2O43187 625 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 GMNNO75496 209 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 JRKO75564 520 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 NTRK1P04629 796 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 NFKB1P19838 968 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 TCN1P20061 433 aaPredicted RBP13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 HPCAL1P37235 193 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 CAP1Q01518 475 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 FRG1Q14331 258 aaKnown RBP13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 NAPRTQ6XQN6 538 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 HACD2Q6Y1H2 254 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 OR2T34Q8NGX1 318 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 OR2T3Q8NH03 318 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 SH3YL1Q96HL8 342 aaPredicted RBP13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 CELF6Q96J87 481 aaKnown RBP13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 TEKT5Q96M29 485 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 PGLYRP2Q96PD5 576 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 CPNE1Q99829 537 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 WDR55Q9H6Y2 383 aaPredicted RBP13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 THG1LQ9NWX6 298 aaKnown RBP13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 BFARQ9NZS9 450 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 NOD1Q9Y239 953 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 TRAF6Q9Y4K3 522 aa13.96□□□□□ -0.18
RABGGTA-220ENST00000560998 TMEM88BA6NKF7 163 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 CENPBD1B2RD01 187 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 NEMP1O14524 444 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 CLOCKO15516 846 aa13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 MSI1O43347 362 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-220ENST00000560998 UGT2B4P06133 528 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms