RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 ENPP7Q6UWV6 458 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 LAYNQ6UX15 382 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 C4orf22Q6V702 233 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 KDM7AQ6ZMT4 941 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 GPR149Q86SP6 731 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 IGDCC3Q8IVU1 814 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 SFTPA1Q8IWL2 248 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 CFAP206Q8IYR0 622 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 ADGRG2Q8IZP9 1017 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 CACNA2D3Q8IZS8 1091 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 TCP10LQ8TDR4 215 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 OSCP1Q8WVF1 389 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 ASB16Q96NS5 453 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 NECTIN4Q96NY8 510 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 NAT9Q9BTE0 207 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 HGH1Q9BTY7 390 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 ATG10Q9H0Y0 220 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 RXFP1Q9HBX9 757 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 CASS4Q9NQ75 786 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 TAS2R13Q9NYV9 303 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 SUN2Q9UH99 717 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 LZTS1Q9Y250 596 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 KCNK6Q9Y257 313 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 STON1Q9Y6Q2 735 aa5.45□□□□□ -1.54
VPS13C-209ENST00000560637 LOC100653049A0A140TA62 436 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 ARHGAP10A1A4S6 786 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 ANKRD66B4E2M5 251 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 FFAR3O14843 346 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 AURKAO14965 403 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 GPR42O15529 346 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 NIPSNAP2O75323 286 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 TBX10O75333 385 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 RASSF9O75901 435 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 KRT34O76011 436 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 STAMBPO95630 424 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 SRCP12931 536 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 HOXD9P28356 352 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 DPYSQ14117 519 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 ADGRE1Q14246 886 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 SLC1A5Q15758 541 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 CHRNA6Q15825 494 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 CRY1Q16526 586 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PDPK2PQ6A1A2 396 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 ARMC6Q6NXE6 501 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PKN3Q6P5Z2 889 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 CRTC1Q6UUV9 634 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 SERPINA9Q86WD7 417 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 FAM160A2Q8N612 972 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 JPH3Q8WXH2 748 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PIGKQ92643 395 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 ART4Q93070 314 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 NXPE3Q969Y0 559 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 TSPAN17Q96FV3 270 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 GPR21Q99679 349 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 FAM167BQ9BTA0 163 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 BTBD1Q9H0C5 482 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 DNAJC28Q9NX36 388 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 ARL15Q9NXU5 204 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 GDE1Q9NZC3 331 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 GRHL1Q9NZI5 618 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 OR1A2Q9Y585 309 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PLXNA1Q9UIW2 1896 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 MYO10Q9HD67 2058 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 GRXCR2A6NFK2 248 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 C16orf96A6NNT2 1141 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 CXorf49A8MYA2 514 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 F8W8V4 182 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 CES2O00748 559 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 TIMM44O43615 452 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 KDELR3O43731 214 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 HAUS5O94927 633 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 OR56A5P0C7T3 313 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 TFEBP19484 476 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 HTR1BP28222 390 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 RFX3P48380 749 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 NAGLUP54802 743 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 CLDN2P57739 230 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 AP1S1P61966 158 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 STX3Q13277 289 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 GRM3Q14832 879 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PAFAH1B3Q15102 231 aaKnown RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 AMZ1Q400G9 498 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 FUT11Q495W5 492 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 GALNTL6Q49A17 601 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 SYCE2Q6PIF2 218 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 TMEM220Q6QAJ8 160 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 TAF8Q7Z7C8 310 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PIM3Q86V86 326 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 LRRC49Q8IUZ0 686 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 RNF217Q8TC41 542 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PPP1R2P1Q96PQ5 205 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 CARS2Q9HA77 564 aaKnown RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 USP29Q9HBJ7 922 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 SEMA4BQ9NPR2 832 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 VPS45Q9NRW7 570 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 EFR3BQ9Y2G0 817 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 MTO1Q9Y2Z2 717 aaKnown RBP5.44□□□□□ -1.54
VPS13C-209ENST00000560637 PRUNE2Q8WUY3 3088 aa5.44□□□□□ -1.54
VPS13C-209ENST00000560637 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms