RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 DPPA4Q7L190 304 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 LMNTD2Q8IXW0 634 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 OR4L1Q8NH43 312 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 ATP6V1G3Q96LB4 118 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 FKBPLQ9UIM3 349 aa12.18□□□□□ -0.46
HERC1-205ENST00000559886 OR51F1A6NGY5 319 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 AREL1O15033 823 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 SPINT1O43278 529 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 C7P10643 843 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 COL9A1P20849 921 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 C5AR1P21730 350 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 GP5P40197 560 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 NEK3P51956 506 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 STC1P52823 247 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 RPS14P62263 151 aaKnown RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 RALGDSQ12967 914 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 ARHGEF7Q14155 803 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 TMED2Q15363 201 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 ZNF776Q68DI1 518 aaPredicted RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 ZNF470Q6ECI4 717 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 PACS1Q6VY07 963 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 PTAR1Q7Z6K3 402 aaPredicted RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 UBALD2Q8IYN6 164 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 CBARPQ8N350 705 aaPredicted RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 GPR150Q8NGU9 434 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 PBXIP1Q96AQ6 731 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 SHDQ96IW2 340 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 MCMBPQ9BTE3 642 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 MKRN2Q9H000 416 aaKnown RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 BCCIPQ9P287 314 aaKnown RBP eCLIP12.17□□□□□ -0.46
HERC1-205ENST00000559886 TXNDC16Q9P2K2 825 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 FBXL21Q9UKT6 434 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 MMP17Q9ULZ9 603 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 MRPS17Q9Y2R5 130 aaKnown RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 PLK4O00444 970 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 MID1O15344 667 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 BPIP17213 487 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 DRD3P35462 400 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 P2RY2P41231 377 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 SERPINB9P50453 376 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 XIAPP98170 497 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 ELP6Q0PNE2 266 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 CNTN1Q12860 1018 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 PEX6Q13608 980 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 AFTPHQ6ULP2 937 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 KIAA0408Q6ZU52 694 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 STRA8Q7Z7C7 330 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 CILP2Q8IUL8 1156 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 DENND6AQ8IWF6 608 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 SYNPOQ8N3V7 929 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 C2CD4AQ8NCU7 369 aaPredicted RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 RAB7BQ96AH8 199 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 TLCD1Q96CP7 247 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 ASB2Q96Q27 587 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 STMN4Q9H169 189 aaPredicted RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 MARCH4Q9P2E8 410 aaPredicted RBP12.17□□□□□ -0.46
HERC1-205ENST00000559886 FBXO5Q9UKT4 447 aa12.17□□□□□ -0.46
HERC1-205ENST00000559886 HMGB1P1B2RPK0 211 aaPredicted RBP12.16□□□□□ -0.46
HERC1-205ENST00000559886 CD3EAPO15446 510 aaKnown RBP12.16□□□□□ -0.46
HERC1-205ENST00000559886 C1SP09871 688 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 TARSP26639 723 aaKnown RBP12.16□□□□□ -0.46
HERC1-205ENST00000559886 SLC1A2P43004 574 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 PTPN5P54829 565 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 CTBP1Q13363 440 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 PIP5KL1Q5T9C9 394 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 GRTP1Q5TC63 336 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 LGSNQ5TDP6 509 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 KCTD16Q68DU8 428 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 GALNT7Q86SF2 657 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 TMPRSS6Q8IU80 811 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 CNPY4Q8N129 248 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 AADATQ8N5Z0 425 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 MZB1Q8WU39 189 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 CATSPERZQ9NTU4 200 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 NOVA2Q9UNW9 492 aaKnown RBP12.16□□□□□ -0.46
HERC1-205ENST00000559886 PLXNA2O75051 1894 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 IQANK1A0A1B0GTG1 560 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 KANSL1LA0AUZ9 987 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 H0Y858 1186 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 GAPDHSO14556 408 aaPredicted RBP12.16□□□□□ -0.46
HERC1-205ENST00000559886 KRT37O76014 449 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 KRT38O76015 456 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 AHSGP02765 367 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 CNTFP26441 200 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 GABRB3P28472 473 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 ATP5DP30049 168 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 MC4RP32245 332 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 FOXN2P32314 431 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 SPINT3P49223 89 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 CSE1LP55060 971 aaKnown RBP12.16□□□□□ -0.46
HERC1-205ENST00000559886 MRNIPQ6NTE8 343 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 LIPIQ6XZB0 460 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 RBBP8Q99708 897 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 LMAN1LQ9HAT1 526 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 LTB4R2Q9NPC1 389 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 IL26Q9NPH9 171 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 APPL1Q9UKG1 709 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 ITM2BQ9Y287 266 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms