RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 HENMT1Q5T8I9 393 aaKnown RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 STPG1Q5TH74 334 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 ARHGEF18Q6ZSZ5 1173 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 PTAR1Q7Z6K3 402 aaPredicted RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 RABEPKQ7Z6M1 372 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 PDCD7Q8N8D1 485 aaKnown RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 GPR26Q8NDV2 337 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 RMDN1Q96DB5 314 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 NUS1Q96E22 293 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 TBL1YQ9BQ87 522 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 GTPBP2Q9BX10 602 aaKnown RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 NUSAP1Q9BXS6 441 aaKnown RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 ADGRE3Q9BY15 652 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 TCEAL2Q9H3H9 227 aaPredicted RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 ARNT2Q9HBZ2 717 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 HAUS2Q9NVX0 235 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 CNOT6Q9ULM6 557 aaKnown RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 OR1A2Q9Y585 309 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 KCTD3Q9Y597 815 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 PCYT1BQ9Y5K3 369 aaPredicted RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 SPTY2D1-AS1A0A0U1RR47 76 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 A0A1B0GTQ1 180 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 CTAGE9A4FU28 777 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 FPGTO14772 594 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 GPR39O43194 453 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 BUD23O43709 281 aaKnown RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 STK10O94804 968 aaKnown RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 SUN1O94901 812 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 FGF1P05230 155 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 GIMD1P0DJR0 217 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 BPIP17213 487 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 HLA-DPA1P20036 260 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 MSNP26038 577 aaKnown RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 LMNB2Q03252 620 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 DPTQ07507 201 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 MTM1Q13496 603 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 STAT4Q14765 748 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 TRIP13Q15645 432 aaPredicted RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 ZNF542PQ5EBM4 170 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 ANKRD22Q5VYY1 191 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 PNCKQ6P2M8 343 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 DBX2Q6ZNG2 339 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 GPR161Q8N6U8 529 aaKnown RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 MAIP1Q8WWC4 291 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 MAGOHBQ96A72 148 aaKnown RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 IFT43Q96FT9 208 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 KLHDC7BQ96G42 594 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 C16orf45Q96MC5 204 aaPredicted RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 APOOQ9BUR5 198 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 TEX101Q9BY14 249 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 DDX47Q9H0S4 455 aaKnown RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 GAREM1Q9H706 876 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 IL17CQ9P0M4 197 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 NFKBIL1Q9UBC1 381 aaPredicted RBP11.41□□□□□ -0.58
SNX1-204ENST00000559061 BTBD3Q9Y2F9 522 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 ARL5AQ9Y689 179 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 SAR1BQ9Y6B6 198 aa11.41□□□□□ -0.58
SNX1-204ENST00000559061 COL5A1P20908 1838 aaPredicted RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 TMEM202A6NGA9 273 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 LDB2O43679 373 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 ZNF189O75820 626 aaPredicted RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 TMEM63AO94886 807 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 SLC4A1P02730 911 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 CELA2BP08218 269 aaPredicted RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 TEAD1P28347 426 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 MAGEA6P43360 314 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 RABIFP47224 123 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 RXRGP48443 463 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 ZNF140P52738 457 aaPredicted RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 OVGP1Q12889 678 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 BNIP3Q12983 259 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 PDE1CQ14123 709 aaPredicted RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 ARHGEF7Q14155 803 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 KCNJ11Q14654 390 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 NFATC4Q14934 902 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 TEAD4Q15561 434 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 RSPO4Q2I0M5 234 aaPredicted RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 ALG11Q2TAA5 492 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 CCDC137Q6PK04 289 aaKnown RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 ZNF765Q7L2R6 523 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 PIP4P1Q86T03 277 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 TRIM74Q86UV6 250 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 HEATR4Q86WZ0 1026 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 RBFAQ8N0V3 343 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 AGGF1Q8N302 714 aaeCLIP11.4□□□□□ -0.58
SNX1-204ENST00000559061 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 PAF1Q8N7H5 531 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 OR52K1Q8NGK4 314 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 SLCO2A1Q92959 643 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 PDXPQ96GD0 296 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 COX14Q96I36 57 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 ELF4Q99607 663 aaPredicted RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 RIOK2Q9BVS4 552 aaKnown RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 FSD1LQ9BXM9 530 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 ZDHHC5Q9C0B5 715 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 ERVMER34-1Q9H9K5 563 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 ZFYVE1Q9HBF4 777 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 FGF22Q9HCT0 170 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 BPIFA1Q9NP55 256 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms