RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MTSS1O43312 755 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 PIAS2O75928 621 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 AGTP01019 485 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 CSF2P04141 144 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 GOLGA6DP0CG33 693 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 CA4P22748 312 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 YPEL5P62699 121 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 SNX1Q13596 522 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 SEL1L2Q5TEA6 688 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 LYSMD3Q7Z3D4 306 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 SLCO6A1Q86UG4 719 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 FAM71DQ8N9W8 422 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 IPMKQ8NFU5 416 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 SLC35B2Q8TB61 432 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 FAM174AQ8TBP5 190 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 ANP32BQ92688 251 aaKnown RBP13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 VAT1Q99536 393 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 APOL2Q9BQE5 337 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 TMEM121Q9BTD3 319 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 MRPL40Q9NQ50 206 aaKnown RBP13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 GOLGA6AQ9NYA3 693 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 FAM153AQ9UHL3 310 aa13.82□□□□□ -0.2
TSPAN3-205ENST00000558745 C1orf232A0A0U1RR37 186 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 LOC285095A0A1B0GVY8 99 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 FLRT2O43155 660 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 SLC4A1P02730 911 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 CELA2BP08218 269 aaPredicted RBP13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 ATXN1LP0C7T5 689 aaKnown RBP13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 GIMD1P0DJR0 217 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 JUNDP17535 347 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 NFKBIAP25963 317 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 PSMB4P28070 264 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 STC1P52823 247 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 RPL26P61254 145 aaKnown RBP13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 MTM1Q13496 603 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 SPARCL1Q14515 664 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 CCDC157Q569K6 752 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 FAXCQ5TGI0 409 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 PARGQ86W56 976 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 OXR1Q8N573 874 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 TTC13Q8NBP0 860 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 TRIM58Q8NG06 486 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 BAHD1Q8TBE0 780 aaPredicted RBP13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 LMX1AQ8TE12 382 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 PTCD2Q8WV60 388 aaKnown RBP13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 AP2M1Q96CW1 435 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 WDR24Q96S15 920 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 LYSMD1Q96S90 227 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 RIOK2Q9BVS4 552 aaKnown RBP13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 ADGRE3Q9BY15 652 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 TRHDEQ9UKU6 1024 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 PYCARDQ9ULZ3 195 aa13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 RPL26L1Q9UNX3 145 aaKnown RBP13.81□□□□□ -0.2
TSPAN3-205ENST00000558745 PSMD11O00231 422 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 CEP104O60308 925 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 GCATO75600 419 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 METTL18O95568 372 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 NDST3O95803 873 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 SOD1P00441 154 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 FUCA1P04066 466 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 ETS1P14921 441 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 NME1P15531 152 aaKnown RBP13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 SPINK2P20155 84 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 TRIM23P36406 574 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 GRK6P43250 576 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 POLD2P49005 469 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 PTK2BQ14289 1009 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 NFATC4Q14934 902 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 SIX1Q15475 284 aaPredicted RBP13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 ALG11Q2TAA5 492 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 SIRPB2Q5JXA9 342 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 ZNF569Q5MCW4 686 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 RAET1GQ6H3X3 334 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 ESRP1Q6NXG1 681 aaKnown RBP13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 MACC1Q6ZN28 852 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 HEATR4Q86WZ0 1026 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 HID1Q8IV36 788 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 PHACTR4Q8IZ21 702 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 SLC35F6Q8N357 371 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 OR1E3Q8WZA6 343 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 SPATA13Q96N96 652 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 FICDQ9BVA6 458 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 GBA3Q9H227 469 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 SUDS3Q9H7L9 328 aaPredicted RBP13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 BPIFA1Q9NP55 256 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 MOSPD1Q9UJG1 213 aa13.8□□□□□ -0.2
TSPAN3-205ENST00000558745 INPP4BO15327 924 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 SIGLEC6O43699 453 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 BUD23O43709 281 aaKnown RBP13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 LIASO43766 372 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 USP12O75317 370 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 FTH1P19P0C7X4 201 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 ZNF30P17039 623 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 GPR1P46091 355 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 SRP54P61011 504 aaKnown RBP13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 PPARDQ03181 441 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 FOXC1Q12948 553 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 PTPRCAPQ14761 206 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 DEFB133Q30KQ1 61 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 244.1 ms