RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 KIAA1324Q6UXG2 1013 aaKnown RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 ZNF765Q7L2R6 523 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 SLC26A11Q86WA9 606 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 LRRC6Q86X45 466 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 TTC30BQ8N4P2 665 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 TMEM105Q8N8V8 129 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 MDGA1Q8NFP4 955 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 OR6P1Q8NGX9 317 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 HEXDCQ8WVB3 486 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 ASB12Q8WXK4 309 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 ULK4Q96C45 1275 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 CERS2Q96G23 380 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 MRGPRX1Q96LB2 322 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 SMIM14Q96QK8 99 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 MKRN2Q9H000 416 aaKnown RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 BTBD1Q9H0C5 482 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 STMN4Q9H169 189 aaPredicted RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 PCED1AQ9H1Q7 454 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 ACSS3Q9H6R3 686 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 PPANQ9NQ55 473 aaKnown RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 ITM2CQ9NQX7 267 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 C20orf96Q9NUD7 363 aaPredicted RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 PIH1D1Q9NWS0 290 aaKnown RBP12.4□□□□□ -0.42
TPM1-209ENST00000558072 MOCS1Q9NZB8 636 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 ZFATQ9P243 1243 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 SLC24A2Q9UI40 661 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 FADS3Q9Y5Q0 445 aa12.4□□□□□ -0.42
TPM1-209ENST00000558072 MYLKQ15746 1914 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CCDC163A0A0D9SF12 145 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 ZCWPW2A0A1B0GU75 182 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 EXOC1LA0A1B0GW35 172 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 A0A1W2PP55 124 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 TCRBV9S1A1TA0A576 114 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 NPIPB15A6NHN6 443 aaPredicted RBP12.39□□□□□ -0.43
TPM1-209ENST00000558072 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 WNT9AO14904 365 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 PLRG1O43660 514 aaKnown RBP12.39□□□□□ -0.43
TPM1-209ENST00000558072 LZTS3O60299 673 aaPredicted RBP12.39□□□□□ -0.43
TPM1-209ENST00000558072 OPA1O60313 960 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CLDN7O95471 211 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 PRKCGP05129 697 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 ALPIP09923 528 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 AOC1P19801 751 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 ITGALP20701 1170 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 SSTR1P30872 391 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 HOXA6P31267 233 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 SPINT3P49223 89 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 SERPINB9P50453 376 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CRADDP78560 199 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CREB5Q02930 508 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 DMWDQ09019 674 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 MTAPQ13126 283 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 FASTKD3Q14CZ7 662 aaKnown RBP12.39□□□□□ -0.43
TPM1-209ENST00000558072 PTPRRQ15256 657 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 RASA2Q15283 850 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CNGA3Q16281 694 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CDKN3Q16667 212 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 ZNF284Q2VY69 593 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 FASTKD1Q53R41 847 aaKnown RBP12.39□□□□□ -0.43
TPM1-209ENST00000558072 LRRC73Q5JTD7 316 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
TPM1-209ENST00000558072 ESRP1Q6NXG1 681 aaKnown RBP12.39□□□□□ -0.43
TPM1-209ENST00000558072 TSSK4Q6SA08 328 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 LYSMD3Q7Z3D4 306 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 GALNT7Q86SF2 657 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 C11orf74Q86VG3 221 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 KCNMB4Q86W47 210 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 ZSWIM9Q86XI8 627 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 OR4K2Q8NGD2 314 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 GPR150Q8NGU9 434 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 OR4L1Q8NH43 312 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 FBF1Q8TES7 1133 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 MFSD3Q96ES6 412 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CDKN2AIPNLQ96HQ2 116 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 ZSCAN5AQ9BUG6 496 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 TMEM109Q9BVC6 243 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 FAM83DQ9H4H8 585 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CD248Q9HCU0 757 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 DLGAP2Q9P1A6 1054 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 VPS18Q9P253 973 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 EBF1Q9UH73 591 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 CORO1CQ9ULV4 474 aaPredicted RBP12.39□□□□□ -0.43
TPM1-209ENST00000558072 SPO11Q9Y5K1 396 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 ARL5AQ9Y689 179 aa12.39□□□□□ -0.43
TPM1-209ENST00000558072 VCANP13611 3396 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 TRIOO75962 3097 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 GLYATL1P3A0A0U1RQE8 302 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 CDH16O75309 829 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 TM7SF2O76062 418 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 PCDH8O95206 1070 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 VAPBO95292 243 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 INHBAP08476 426 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 PIRTP0C851 137 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 MYZAPP0CAP1 466 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 GABRG2P18507 467 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 NDUFV2P19404 249 aa12.38□□□□□ -0.43
TPM1-209ENST00000558072 OGNP20774 298 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms